Detailed information NTG0965023

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACJ63U_RS23595
• Genome accession: NZ_CP174453
• Coordinates: 4800684..4801709 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O25b:H4-ST131 strain MB1341
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4795684..4806709

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ63U_RS23575 (ACJ63U_23575)	metJ	4796869..4797186 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACJ63U_RS23580 (ACJ63U_23580)	yiiX	4797246..4797854 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACJ63U_RS23585 (ACJ63U_23585)	rpmE	4797915..4798127 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACJ63U_RS23590 (ACJ63U_23590)	priA	4798330..4800528 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACJ63U_RS23595 (ACJ63U_23595)	cytR	4800684..4801709 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACJ63U_RS23600 (ACJ63U_23600)	ftsN	4801801..4802760 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACJ63U_RS23605 (ACJ63U_23605)	hslV	4802853..4803383 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACJ63U_RS23610 (ACJ63U_23610)	hslU	4803393..4804724 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACJ63U_RS23615 (ACJ63U_23615)	menA	4804791..4805717 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACJ63U_RS23620 (ACJ63U_23620)	rraA	4805810..4806295 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACJ63U_RS23625 (ACJ63U_23625)	zapB	4806380..4806625 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=965023 ACJ63U_RS23595 WP_000644908.1 4800684..4801709(+) (cytR) [Escherichia coli O25b:H4-ST131 strain MB1341]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=965023 ACJ63U_RS23595 WP_000644908.1 4800684..4801709(+) (cytR) [Escherichia coli O25b:H4-ST131 strain MB1341]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625