Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSU16_RS07705 Genome accession   NZ_CP150176
Coordinates   1482389..1482973 (+) Length   194 a.a.
NCBI ID   WP_010334068.1    Uniprot ID   A0AAP3CRU9
Organism   Bacillus sp. FSL K6-1003     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1477389..1487973
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU16_RS07675 (NSU16_07675) dapD 1477562..1478272 (+) 711 WP_339192466.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSU16_RS07680 (NSU16_07680) - 1478343..1479467 (+) 1125 WP_268505548.1 N-acetyldiaminopimelate deacetylase -
  NSU16_RS07685 (NSU16_07685) - 1479528..1479773 (+) 246 WP_010334064.1 YkuS family protein -
  NSU16_RS07690 (NSU16_07690) - 1479808..1480611 (-) 804 WP_010334065.1 mechanosensitive ion channel family protein -
  NSU16_RS07695 (NSU16_07695) ahpA 1480856..1481398 (+) 543 WP_339192467.1 biofilm-specific peroxidase AhpA -
  NSU16_RS07700 (NSU16_07700) ykuV 1481480..1481938 (+) 459 WP_339192468.1 thiol-disulfide oxidoreductase YkuV -
  NSU16_RS07705 (NSU16_07705) rok 1482389..1482973 (+) 585 WP_010334068.1 transcriptional regulator Rok Regulator
  NSU16_RS07710 (NSU16_07710) - 1483016..1483981 (-) 966 WP_339192469.1 sporulation protein -
  NSU16_RS07715 (NSU16_07715) - 1484114..1484713 (+) 600 WP_168747654.1 molybdenum cofactor guanylyltransferase -
  NSU16_RS07720 (NSU16_07720) - 1484765..1485784 (+) 1020 WP_095714704.1 MoeB/ThiF family adenylyltransferase -
  NSU16_RS07725 (NSU16_07725) glp 1485802..1487094 (+) 1293 WP_010334072.1 gephyrin-like molybdotransferase Glp -
  NSU16_RS07730 (NSU16_07730) mobB 1487055..1487576 (+) 522 WP_339192470.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22131.11 Da        Isoelectric Point: 9.7169

>NTDB_id=964993 NSU16_RS07705 WP_010334068.1 1482389..1482973(+) (rok) [Bacillus sp. FSL K6-1003]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQTISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESVESTESATE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=964993 NSU16_RS07705 WP_010334068.1 1482389..1482973(+) (rok) [Bacillus sp. FSL K6-1003]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTACGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAACGAAAAAGGAGTTCC
GTTCTGAAAGAAAAACTGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAGCCTCAGCTTCAAACTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACAAGAAGAAG
AAGAGGAACGGCAAGACCGGGGTCAAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAAAGTTCCGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTGGAAATTCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTATCCTGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGCGAAATCGAATCCGTTGA
ATCAACTGAATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

94.709

97.423

0.923

Multiple sequence alignment