Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NSU16_RS07600 Genome accession   NZ_CP150176
Coordinates   1466143..1466607 (-) Length   154 a.a.
NCBI ID   WP_168747640.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1003     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1461143..1471607
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU16_RS07580 (NSU16_07580) kinA 1461395..1463215 (+) 1821 WP_168747635.1 sporulation histidine kinase KinA -
  NSU16_RS07585 (NSU16_07585) - 1463239..1464408 (-) 1170 WP_010334041.1 aminotransferase A -
  NSU16_RS07590 (NSU16_07590) - 1464610..1464771 (-) 162 WP_339192462.1 hypothetical protein -
  NSU16_RS07595 (NSU16_07595) cheV 1464979..1465890 (+) 912 WP_168747638.1 chemotaxis protein CheV -
  NSU16_RS07600 (NSU16_07600) kre 1466143..1466607 (-) 465 WP_168747640.1 YkyB family protein Regulator
  NSU16_RS07605 (NSU16_07605) - 1466732..1468024 (-) 1293 WP_168747642.1 MFS transporter -
  NSU16_RS07610 (NSU16_07610) - 1468100..1468594 (-) 495 WP_268505757.1 L,D-transpeptidase family protein -
  NSU16_RS07615 (NSU16_07615) - 1468652..1469512 (-) 861 WP_339181245.1 metallophosphoesterase -
  NSU16_RS07620 (NSU16_07620) fadH 1469657..1470421 (+) 765 WP_326330634.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17840.63 Da        Isoelectric Point: 10.4212

>NTDB_id=964992 NSU16_RS07600 WP_168747640.1 1466143..1466607(-) (kre) [Bacillus sp. FSL K6-1003]
MDDHAYSKDLQPTVDNLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQQYVGMKEKPLVANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=964992 NSU16_RS07600 WP_168747640.1 1466143..1466607(-) (kre) [Bacillus sp. FSL K6-1003]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGATAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAGCAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAACAATACGTCGGCATGAAAGAAAAACCGCTTGTGG
CGAATCGCCAGCAGCCTGCATATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

97.403

100

0.974

Multiple sequence alignment