Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NSU16_RS06210 Genome accession   NZ_CP150176
Coordinates   1218833..1219984 (+) Length   383 a.a.
NCBI ID   WP_339192309.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1003     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1213833..1224984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU16_RS06180 (NSU16_06180) - 1214506..1215723 (+) 1218 WP_339192657.1 MFS transporter -
  NSU16_RS06185 (NSU16_06185) - 1215889..1216467 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  NSU16_RS06190 (NSU16_06190) spx 1216646..1217041 (+) 396 WP_010333748.1 transcriptional regulator Spx -
  NSU16_RS06195 (NSU16_06195) - 1217084..1217740 (-) 657 WP_339192308.1 TerC family protein -
  NSU16_RS06200 (NSU16_06200) - 1217927..1218037 (+) 111 WP_128568472.1 hypothetical protein -
  NSU16_RS06205 (NSU16_06205) mecA 1218019..1218675 (+) 657 WP_010333750.1 adaptor protein MecA Regulator
  NSU16_RS06210 (NSU16_06210) coiA 1218833..1219984 (+) 1152 WP_339192309.1 competence protein CoiA family protein Machinery gene
  NSU16_RS06215 (NSU16_06215) pepF 1220214..1222043 (+) 1830 WP_339192310.1 oligoendopeptidase F -
  NSU16_RS06220 (NSU16_06220) - 1222081..1222248 (-) 168 WP_010333753.1 hypothetical protein -
  NSU16_RS06225 (NSU16_06225) spxH 1222562..1223461 (-) 900 WP_010333755.1 protease adaptor protein SpxH -
  NSU16_RS06230 (NSU16_06230) - 1223458..1223856 (-) 399 WP_339192311.1 thiol management oxidoreductase -
  NSU16_RS06235 (NSU16_06235) - 1224123..1224854 (-) 732 WP_339192312.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44622.68 Da        Isoelectric Point: 10.0577

>NTDB_id=964988 NSU16_RS06210 WP_339192309.1 1218833..1219984(+) (coiA) [Bacillus sp. FSL K6-1003]
MFSAVTEDGQVFHLIGRQSREKLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKASPLLEPYVKEIKQRPDILAKVKGNTLAVEYQCATLPPDVFQKRTAGFKQAGMIPRWILGGSRLKRTSSSFYQLSAF
HWQFINTSQNSNLLCYCPKTHSFLRLSHMIPFYTTHFYCSVQTIPVRQAAAENLFFTESDSSFKHTDWTGAILRFRRKTH
RFLSKDINRLRLLFYEKRQTPLSFLPTEVFVPVQKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAILQHCKLHIHKK
NILLRGEYSDQGLSEAVKQYIEFLCKKGFLRETQKEVYVLNQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=964988 NSU16_RS06210 WP_339192309.1 1218833..1219984(+) (coiA) [Bacillus sp. FSL K6-1003]
TTGTTTAGTGCTGTGACAGAAGACGGTCAAGTTTTCCACCTCATAGGCAGGCAGAGCAGAGAAAAATTAAAGCAGACCAG
GTTTTTTTGCCCGGTGTGTGCAGAGGAGCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTATATGTATGGCTGAAA
ACGCAAAAGGCTTCACCGCTCTTAGAGCCGTATGTGAAAGAGATTAAACAAAGGCCCGACATCTTGGCGAAAGTTAAGGG
AAATACGCTTGCTGTTGAATACCAATGCGCGACTCTCCCTCCTGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGAATGATACCGCGGTGGATTCTTGGGGGCAGCCGCTTAAAACGGACATCTTCATCCTTTTACCAGCTGTCCGCTTTC
CATTGGCAGTTTATCAATACCAGTCAGAACAGCAATCTGTTATGTTACTGCCCCAAAACACATTCTTTCCTGAGGCTCAG
CCACATGATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCTGTCCGTCAGGCAGCGGCAGAAAATC
TCTTTTTCACTGAATCGGATTCATCGTTTAAGCATACAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGGTTTCTCTCTAAAGATATAAATCGGCTTAGGCTTTTGTTTTATGAAAAACGGCAAACGCCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTACAGAAAGGAGCCGTTTTCAAGAGTCCCGTTTTTGTATGGCAGGGTTATCTTTATCTGTTTA
TTACGGATCTTGGGTATAAACATGCGCCCATTCGCTTTTCAGCCATTTTGCAGCACTGCAAACTACACATTCATAAAAAG
AACATTCTGCTCAGAGGAGAATACAGCGATCAGGGTCTCAGTGAGGCTGTTAAACAGTACATTGAATTTTTGTGCAAGAA
GGGATTTTTAAGAGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCCGCAAAGCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.335

97.389

0.734


Multiple sequence alignment