Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NSU16_RS06095 Genome accession   NZ_CP150176
Coordinates   1196549..1196740 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus sp. FSL K6-1003     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1191549..1201740
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU16_RS06065 (NSU16_06065) argF 1192378..1193334 (+) 957 WP_339192303.1 ornithine carbamoyltransferase -
  NSU16_RS06070 (NSU16_06070) - 1193436..1193615 (+) 180 WP_010333726.1 YjzC family protein -
  NSU16_RS06075 (NSU16_06075) - 1193661..1193846 (-) 186 WP_010333727.1 YjzD family protein -
  NSU16_RS06080 (NSU16_06080) - 1194105..1194842 (+) 738 WP_268446757.1 hypothetical protein -
  NSU16_RS06085 (NSU16_06085) - 1194926..1195489 (+) 564 WP_339192304.1 hypothetical protein -
  NSU16_RS06090 (NSU16_06090) med 1195581..1196534 (+) 954 WP_010333730.1 BMP family ABC transporter substrate-binding protein Regulator
  NSU16_RS06095 (NSU16_06095) comZ 1196549..1196740 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NSU16_RS06100 (NSU16_06100) - 1196770..1197000 (-) 231 WP_081638273.1 hypothetical protein -
  NSU16_RS06105 (NSU16_06105) fabH 1197166..1198104 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  NSU16_RS06110 (NSU16_06110) fabF 1198127..1199365 (+) 1239 WP_106022352.1 beta-ketoacyl-ACP synthase II -
  NSU16_RS06115 (NSU16_06115) - 1199445..1200230 (+) 786 WP_339192305.1 DUF2268 domain-containing protein -
  NSU16_RS06120 (NSU16_06120) appD 1200420..1201406 (+) 987 WP_339192306.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=964984 NSU16_RS06095 WP_003224559.1 1196549..1196740(+) (comZ) [Bacillus sp. FSL K6-1003]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=964984 NSU16_RS06095 WP_003224559.1 1196549..1196740(+) (comZ) [Bacillus sp. FSL K6-1003]
ATGCAGCACGAAAAATCACTTGAGTTTTTGCAAATTGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTGGAAAAATC
GGGAATAGAACTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGGCGGAAGCCTACGAGCTAG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment