Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | NSU16_RS00245 | Genome accession | NZ_CP150176 |
| Coordinates | 44414..44704 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus sp. FSL K6-1003 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39414..49704
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSU16_RS00205 (NSU16_00205) | darA | 39434..39763 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| NSU16_RS00210 (NSU16_00210) | - | 39776..40216 (+) | 441 | WP_010332684.1 | YaaR family protein | - |
| NSU16_RS00215 (NSU16_00215) | holB | 40228..41217 (+) | 990 | WP_339191850.1 | DNA polymerase III subunit delta' | - |
| NSU16_RS00220 (NSU16_00220) | ricT | 41220..42047 (+) | 828 | WP_010332686.1 | competence/sporulation regulator complex protein RicT | - |
| NSU16_RS00225 (NSU16_00225) | yabA | 42062..42421 (+) | 360 | WP_010332687.1 | replication initiation-control protein YabA | - |
| NSU16_RS00230 (NSU16_00230) | - | 42482..43225 (+) | 744 | WP_339191851.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| NSU16_RS00235 (NSU16_00235) | - | 43212..43511 (+) | 300 | WP_339179241.1 | GIY-YIG nuclease family protein | - |
| NSU16_RS00240 (NSU16_00240) | rsmI | 43486..44364 (+) | 879 | WP_168746747.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| NSU16_RS00245 (NSU16_00245) | abrB | 44414..44704 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| NSU16_RS00250 (NSU16_00250) | metG | 45201..47195 (+) | 1995 | WP_268445186.1 | methionine--tRNA ligase | - |
| NSU16_RS00255 (NSU16_00255) | - | 47274..48041 (+) | 768 | WP_010332691.1 | TatD family hydrolase | - |
| NSU16_RS00260 (NSU16_00260) | - | 48287..49510 (+) | 1224 | WP_229150235.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=964964 NSU16_RS00245 WP_003226760.1 44414..44704(-) (abrB) [Bacillus sp. FSL K6-1003]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=964964 NSU16_RS00245 WP_003226760.1 44414..44704(-) (abrB) [Bacillus sp. FSL K6-1003]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCCGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |