Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NSS75_RS12940 Genome accession   NZ_CP150175
Coordinates   2518676..2519479 (-) Length   267 a.a.
NCBI ID   WP_010334880.1    Uniprot ID   A0A9Q4HNW6
Organism   Bacillus sp. FSL K6-1012     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2513676..2524479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS12910 (NSS75_12910) - 2514692..2515435 (-) 744 WP_185848840.1 glycerophosphodiester phosphodiesterase -
  NSS75_RS12915 (NSS75_12915) - 2515525..2516145 (-) 621 WP_083244528.1 N-acetylmuramoyl-L-alanine amidase -
  NSS75_RS12920 (NSS75_12920) - 2516168..2516458 (-) 291 WP_024121999.1 hypothetical protein -
  NSS75_RS12925 (NSS75_12925) - 2516787..2516921 (+) 135 WP_339233317.1 hypothetical protein -
  NSS75_RS12930 (NSS75_12930) - 2516994..2518112 (+) 1119 WP_268544934.1 NADH-dependent flavin oxidoreductase -
  NSS75_RS12935 (NSS75_12935) - 2518349..2518528 (-) 180 WP_339233319.1 hypothetical protein -
  NSS75_RS12940 (NSS75_12940) spo0A 2518676..2519479 (-) 804 WP_010334880.1 sporulation transcription factor Spo0A Regulator
  NSS75_RS12945 (NSS75_12945) spoIVB 2519755..2521032 (-) 1278 WP_024122004.1 SpoIVB peptidase -
  NSS75_RS12950 (NSS75_12950) recN 2521207..2522937 (-) 1731 WP_101861022.1 DNA repair protein RecN Machinery gene
  NSS75_RS12955 (NSS75_12955) argR 2522973..2523422 (-) 450 WP_010334883.1 arginine repressor ArgR -
  NSS75_RS12960 (NSS75_12960) - 2523519..2524364 (-) 846 WP_024122006.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29719.20 Da        Isoelectric Point: 6.3913

>NTDB_id=964920 NSS75_RS12940 WP_010334880.1 2518676..2519479(-) (spo0A) [Bacillus sp. FSL K6-1012]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKRKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=964920 NSS75_RS12940 WP_010334880.1 2518676..2519479(-) (spo0A) [Bacillus sp. FSL K6-1012]
GTGGAGAAAATTAAAGTTTGTGTTGCTGACGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTCATCGGAGTTGCTTATAACGGACAGGAATGCCTGTCGCTATTTAAAGAAAAAGATCCTGATGTGCTCG
TCTTGGATATTATTATGCCTCATTTGGACGGACTTGCTGTTTTAGAGCGACTGAGAGAATCCGATCTGAAAAAACAGCCA
AACGTCATCATGCTGACAGCCTTCGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGAGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTCGGCCATATTCGCCAGGTCAGCGGAAATGCCAGCAGTGTGACGCATCGCGCGC
CGTCATCACAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAAAGGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCTGCACATATTAAAGGCTATCTCTATCTGCGTGAAGCGATCTCAATGGTGTACAACGACAT
CGAACTGCTCGGCAGTATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCTAGCCGTGTAGAAA
GAGCGATCCGCCACGCGATTGAAGTGGCATGGAGCAGAGGGAATATTGATTCCATTTCCTCATTGTTCGGCTATACAGTC
AGCATGACGAAGGCAAAACCTACAAATTCAGAGTTCATTGCGATGGTTGCGGATAAGCTGAGATTAGAGCATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

99.625

100

0.996

Multiple sequence alignment