Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSS75_RS08000 Genome accession   NZ_CP150175
Coordinates   1532084..1532659 (+) Length   191 a.a.
NCBI ID   WP_024121230.1    Uniprot ID   A0A9Q4HNH0
Organism   Bacillus sp. FSL K6-1012     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1527084..1537659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS07970 (NSS75_07970) dapD 1527256..1527966 (+) 711 WP_024121226.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSS75_RS07975 (NSS75_07975) - 1528037..1529161 (+) 1125 WP_185848005.1 N-acetyldiaminopimelate deacetylase -
  NSS75_RS07980 (NSS75_07980) - 1529222..1529467 (+) 246 WP_010334064.1 YkuS family protein -
  NSS75_RS07985 (NSS75_07985) - 1529502..1530305 (-) 804 WP_024121228.1 mechanosensitive ion channel family protein -
  NSS75_RS07990 (NSS75_07990) ahpA 1530550..1531092 (+) 543 WP_010334066.1 biofilm-specific peroxidase AhpA -
  NSS75_RS07995 (NSS75_07995) ykuV 1531174..1531632 (+) 459 WP_103671624.1 thiol-disulfide oxidoreductase YkuV -
  NSS75_RS08000 (NSS75_08000) rok 1532084..1532659 (+) 576 WP_024121230.1 transcriptional regulator Rok Regulator
  NSS75_RS08005 (NSS75_08005) - 1532701..1533666 (-) 966 WP_216394613.1 sporulation protein -
  NSS75_RS08010 (NSS75_08010) - 1533799..1534398 (+) 600 WP_216394612.1 molybdenum cofactor guanylyltransferase -
  NSS75_RS08015 (NSS75_08015) - 1534450..1535469 (+) 1020 WP_216394611.1 MoeB/ThiF family adenylyltransferase -
  NSS75_RS08020 (NSS75_08020) glp 1535487..1536779 (+) 1293 WP_103671627.1 gephyrin-like molybdotransferase Glp -
  NSS75_RS08025 (NSS75_08025) mobB 1536740..1537261 (+) 522 WP_101860671.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21761.69 Da        Isoelectric Point: 9.8783

>NTDB_id=964912 NSS75_RS08000 WP_024121230.1 1532084..1532659(+) (rok) [Bacillus sp. FSL K6-1012]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSTSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQSISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGDIESAESATE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=964912 NSS75_RS08000 WP_024121230.1 1532084..1532659(+) (rok) [Bacillus sp. FSL K6-1012]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTAAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCACTTCCGAAACGAAAAAGGAGTTCC
GTTCTGAAAGAAAAACTGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACTAGAAGAAG
AAGAGGAACGGCAAGACCGGGATCTAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAGAGCTCCGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGTTTAATTAAAATGTATCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGTGACATCGAATCAGCTGA
ATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

94.764

100

0.948

Multiple sequence alignment