Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NSS75_RS07885 Genome accession   NZ_CP150175
Coordinates   1512122..1512586 (-) Length   154 a.a.
NCBI ID   WP_268498101.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1012     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1507122..1517586
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS07865 (NSS75_07865) kinA 1507585..1509417 (+) 1833 WP_268498103.1 sporulation histidine kinase KinA -
  NSS75_RS07870 (NSS75_07870) - 1509428..1510597 (-) 1170 WP_024121208.1 aminotransferase A -
  NSS75_RS07875 (NSS75_07875) - 1510799..1510960 (-) 162 WP_003238943.1 hypothetical protein -
  NSS75_RS07880 (NSS75_07880) cheV 1511168..1512079 (+) 912 WP_024121210.1 chemotaxis protein CheV -
  NSS75_RS07885 (NSS75_07885) kre 1512122..1512586 (-) 465 WP_268498101.1 YkyB family protein Regulator
  NSS75_RS07890 (NSS75_07890) - 1512712..1514004 (-) 1293 WP_044156081.1 MFS transporter -
  NSS75_RS07895 (NSS75_07895) - 1514080..1514574 (-) 495 WP_081638296.1 L,D-transpeptidase family protein -
  NSS75_RS07900 (NSS75_07900) - 1514632..1515492 (-) 861 WP_024121214.1 metallophosphoesterase -
  NSS75_RS07905 (NSS75_07905) fadH 1515637..1516401 (+) 765 WP_213418582.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17888.71 Da        Isoelectric Point: 10.4658

>NTDB_id=964911 NSS75_RS07885 WP_268498101.1 1512122..1512586(-) (kre) [Bacillus sp. FSL K6-1012]
MDDHAYSKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQKYVGMKEKPLVTNRQQTAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=964911 NSS75_RS07885 WP_268498101.1 1512122..1512586(-) (kre) [Bacillus sp. FSL K6-1012]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAAAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCAAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAAAAATACGTCGGCATGAAAGAAAAGCCGCTTGTGA
CGAATCGCCAGCAGACCGCTTATCATAAACCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

97.403

100

0.974

Multiple sequence alignment