Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NSS75_RS06510 Genome accession   NZ_CP150175
Coordinates   1267855..1269006 (+) Length   383 a.a.
NCBI ID   WP_339236607.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1012     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1262855..1274006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS06480 (NSS75_06480) - 1263527..1264744 (+) 1218 WP_103672307.1 MFS transporter -
  NSS75_RS06485 (NSS75_06485) - 1264910..1265488 (+) 579 WP_103672306.1 GNAT family N-acetyltransferase -
  NSS75_RS06490 (NSS75_06490) spx 1265668..1266063 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  NSS75_RS06495 (NSS75_06495) - 1266106..1266762 (-) 657 WP_044156385.1 TerC family protein -
  NSS75_RS06500 (NSS75_06500) - 1266949..1267074 (+) 126 WP_120698858.1 hypothetical protein -
  NSS75_RS06505 (NSS75_06505) mecA 1267041..1267697 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  NSS75_RS06510 (NSS75_06510) coiA 1267855..1269006 (+) 1152 WP_339236607.1 competence protein CoiA family protein Machinery gene
  NSS75_RS06515 (NSS75_06515) pepF 1269236..1271065 (+) 1830 WP_176471078.1 oligoendopeptidase F -
  NSS75_RS06520 (NSS75_06520) - 1271101..1271268 (-) 168 WP_024120925.1 hypothetical protein -
  NSS75_RS06525 (NSS75_06525) spxH 1271582..1272481 (-) 900 WP_024120926.1 protease adaptor protein SpxH -
  NSS75_RS06530 (NSS75_06530) - 1272478..1272876 (-) 399 WP_339236611.1 thiol management oxidoreductase -
  NSS75_RS06535 (NSS75_06535) - 1273133..1273864 (-) 732 WP_255238335.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44703.78 Da        Isoelectric Point: 9.7769

>NTDB_id=964907 NSS75_RS06510 WP_339236607.1 1267855..1269006(+) (coiA) [Bacillus sp. FSL K6-1012]
MFSAVTEDGQVFHLIGRQRREQLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKASPLLEPYVKEIKQRPDILAKVKGDTLAVEYQCATLAPDVFQKRTAGFKQAGLIPQWILGGSRLKRTSSSFYQLSAF
HWQFINASPNSDLLCYCPETHSFLRLSRMIPFYTTHFYCSVQTIPIRQAAAEDLFCTEPDSSFKHSDWTGAILRFRRKTH
RFLSKDMNRIRLLFYEKRHTPLSFLPTEVFVPVKKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAVLQHCKIHIHKK
NILLRGVYRDQDFIEAVKQYIEFLCKKGFLRETQKEVYVLNQPANRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=964907 NSS75_RS06510 WP_339236607.1 1267855..1269006(+) (coiA) [Bacillus sp. FSL K6-1012]
TTGTTTAGTGCTGTGACAGAAGACGGCCAAGTGTTTCACCTCATAGGCAGGCAGAGGAGAGAACAATTAAAGCAGACCAG
GTTTTTCTGCCCGGTGTGTGCAGAGGAGCTCGATGTGAAGTTGGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTTTATGTATGGCTGAAA
ACGCAAAAGGCTTCCCCGCTCTTAGAGCCGTACGTGAAAGAGATTAAACAAAGGCCCGACATCTTGGCAAAAGTAAAGGG
GGATACGCTTGCAGTTGAATACCAATGCGCGACTCTCGCTCCAGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGACTGATACCGCAGTGGATTCTTGGAGGCAGCCGCTTAAAACGGACATCATCATCCTTTTACCAGCTGTCCGCTTTC
CATTGGCAGTTTATCAATGCCAGTCCGAACAGCGATCTGTTATGTTACTGCCCCGAAACACATTCTTTCCTGAGGCTCAG
CCGCATGATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCAATCCGCCAGGCAGCGGCTGAAGATT
TATTTTGCACTGAACCAGATTCTTCGTTTAAGCACTCAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGCTTTCTCTCTAAAGATATGAATCGGATCAGGCTTCTGTTTTATGAAAAACGGCATACACCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTAAAGAAAGGAGCTGTTTTTAAGAGCCCCGTTTTTGTATGGCAGGGCTATCTTTATCTGTTTA
TTACGGATCTTGGATATAAACATGCGCCCATTCGCTTTTCAGCCGTTTTGCAGCACTGCAAAATACACATTCATAAAAAG
AACATTTTGCTAAGAGGCGTATACAGGGATCAGGATTTCATTGAGGCGGTTAAACAGTACATTGAGTTTTTGTGCAAGAA
GGGATTTTTGAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCCGCAAACCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.335

97.389

0.734


Multiple sequence alignment