Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSS75_RS02510 Genome accession   NZ_CP150175
Coordinates   482458..483408 (+) Length   316 a.a.
NCBI ID   WP_010333025.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1012     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 477458..488408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS02485 (NSS75_02485) rapC 478849..479997 (+) 1149 WP_339235722.1 response regulator aspartate phosphatase RapC Regulator
  NSS75_RS02490 (NSS75_02490) phrC 479981..480103 (+) 123 WP_024120213.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NSS75_RS02495 (NSS75_02495) - 480208..480300 (-) 93 WP_024120214.1 YjcZ family sporulation protein -
  NSS75_RS02500 (NSS75_02500) - 480447..480557 (-) 111 WP_024120215.1 YjcZ family sporulation protein -
  NSS75_RS02505 (NSS75_02505) - 480708..482072 (-) 1365 WP_101860981.1 aspartate kinase -
  NSS75_RS02510 (NSS75_02510) ceuB 482458..483408 (+) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  NSS75_RS02515 (NSS75_02515) yclO 483401..484348 (+) 948 WP_024120217.1 petrobactin ABC transporter permease YclO -
  NSS75_RS02520 (NSS75_02520) yclP 484342..485100 (+) 759 WP_024120218.1 petrobactin ABC transporter ATP-binding protein YclP -
  NSS75_RS02525 (NSS75_02525) - 485122..486075 (+) 954 WP_024120219.1 siderophore ABC transporter substrate-binding protein -
  NSS75_RS02530 (NSS75_02530) - 486124..487542 (-) 1419 WP_095714088.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35011.45 Da        Isoelectric Point: 9.8262

>NTDB_id=964892 NSS75_RS02510 WP_010333025.1 482458..483408(+) (ceuB) [Bacillus sp. FSL K6-1012]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=964892 NSS75_RS02510 WP_010333025.1 482458..483408(+) (ceuB) [Bacillus sp. FSL K6-1012]
ATGAAGCTACGTTACTTATTTTTTCTACTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAAGAAGAGGCGTCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTCTAA
TCGCGGGCATGAGCATGAGCATCTGCGGACTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCTTTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTTTAGTCGGCAATTTTCTGTTTATGAAAATTCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTAGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACCTGATC
CAGAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTTTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACGTCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCGATCTACAGAGGAGACAACCTGAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCATATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538

Multiple sequence alignment