Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   NSS75_RS02305 Genome accession   NZ_CP150175
Coordinates   422278..422715 (-) Length   145 a.a.
NCBI ID   WP_024120178.1    Uniprot ID   -
Organism   Bacillus sp. FSL K6-1012     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 417278..427715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS75_RS02270 (NSS75_02270) - 417838..418264 (+) 427 Protein_404 RDD family protein -
  NSS75_RS02275 (NSS75_02275) - 418346..418681 (+) 336 WP_268497138.1 YckD family protein -
  NSS75_RS02280 (NSS75_02280) - 418818..419237 (+) 420 WP_024120173.1 MarR family transcriptional regulator -
  NSS75_RS02285 (NSS75_02285) - 419228..419566 (+) 339 WP_339235685.1 DUF3147 family protein -
  NSS75_RS02290 (NSS75_02290) - 419583..420311 (+) 729 WP_024120175.1 AAA family ATPase -
  NSS75_RS02295 (NSS75_02295) - 420384..421817 (+) 1434 WP_095714429.1 family 1 glycosylhydrolase -
  NSS75_RS02300 (NSS75_02300) nin/comJ 421853..422251 (-) 399 WP_095714428.1 competence protein ComJ Regulator
  NSS75_RS02305 (NSS75_02305) nucA/comI 422278..422715 (-) 438 WP_024120178.1 DNA-entry nuclease Machinery gene
  NSS75_RS02310 (NSS75_02310) tlpC 422901..424626 (-) 1726 Protein_412 methyl-accepting chemotaxis protein TlpC -
  NSS75_RS02315 (NSS75_02315) hxlB 424739..425296 (-) 558 WP_101863966.1 6-phospho-3-hexuloisomerase -
  NSS75_RS02320 (NSS75_02320) hxlA 425302..425934 (-) 633 WP_101860162.1 3-hexulose-6-phosphate synthase -
  NSS75_RS02325 (NSS75_02325) hxlR 426166..426528 (+) 363 WP_003241118.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 145 a.a.        Molecular weight: 15973.68 Da        Isoelectric Point: 4.1966

>NTDB_id=964888 NSS75_RS02305 WP_024120178.1 422278..422715(-) (nucA/comI) [Bacillus sp. FSL K6-1012]
MDIIKTLLLVIVVIAAAAVGLIKGDFFSDDQKTSQTEEYDETLAFPSERYPETANHIKDAISEGHSDVCTIDRDGAEERR
EQSLKDVPSKTGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHQLTDYPDGTKVLFTIQ

Nucleotide


Download         Length: 438 bp        

>NTDB_id=964888 NSS75_RS02305 WP_024120178.1 422278..422715(-) (nucA/comI) [Bacillus sp. FSL K6-1012]
ATGGACATTATAAAAACTTTACTTCTCGTAATAGTCGTCATAGCAGCTGCAGCTGTTGGCCTGATTAAGGGAGACTTTTT
CTCAGACGATCAAAAAACGTCTCAAACAGAAGAATATGACGAAACACTGGCCTTCCCTTCTGAGCGTTATCCTGAGACAG
CAAATCATATCAAGGACGCAATAAGTGAGGGGCATTCAGATGTGTGCACCATAGACAGAGACGGAGCTGAGGAACGCCGC
GAACAATCATTAAAAGACGTACCTTCCAAAACAGGGTATGACCGAGATGAATGGCCAATGGCCATGTGCAAAGAAGGCGG
TGAAGGGGCTTCTGTAGAATATATTTCTCCCGCTGACAATCGCGGCGCAGGCTCCTGGGTCGGGCATCAGCTGACCGATT
ACCCTGACGGCACAAAGGTTTTATTTACGATTCAGTAA

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

92.361

99.31

0.917

Multiple sequence alignment