Detailed information NTG0964865

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACJIZ2_RS25305
• Genome accession: NZ_CP174273
• Coordinates: 5055941..5056966 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli O25b:H4-ST131 strain MB1159
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 5050941..5061966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJIZ2_RS25285 (ACJIZ2_25285)	metJ	5052126..5052443 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACJIZ2_RS25290 (ACJIZ2_25290)	yiiX	5052503..5053111 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACJIZ2_RS25295 (ACJIZ2_25295)	rpmE	5053172..5053384 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACJIZ2_RS25300 (ACJIZ2_25300)	priA	5053587..5055785 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACJIZ2_RS25305 (ACJIZ2_25305)	cytR	5055941..5056966 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACJIZ2_RS25310 (ACJIZ2_25310)	ftsN	5057058..5058017 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACJIZ2_RS25315 (ACJIZ2_25315)	hslV	5058110..5058640 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACJIZ2_RS25320 (ACJIZ2_25320)	hslU	5058650..5059981 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACJIZ2_RS25325 (ACJIZ2_25325)	menA	5060048..5060974 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACJIZ2_RS25330 (ACJIZ2_25330)	rraA	5061067..5061552 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACJIZ2_RS25335 (ACJIZ2_25335)	zapB	5061637..5061882 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=964865 ACJIZ2_RS25305 WP_000644908.1 5055941..5056966(+) (cytR) [Escherichia coli O25b:H4-ST131 strain MB1159]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=964865 ACJIZ2_RS25305 WP_000644908.1 5055941..5056966(+) (cytR) [Escherichia coli O25b:H4-ST131 strain MB1159]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625