Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   NSQ41_RS05335 Genome accession   NZ_CP150172
Coordinates   1076557..1077507 (+) Length   316 a.a.
NCBI ID   WP_339199146.1    Uniprot ID   -
Organism   Aeribacillus sp. FSL K6-8210     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1071557..1082507
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ41_RS05320 (NSQ41_05320) - 1074228..1074410 (-) 183 WP_063387013.1 YjzD family protein -
  NSQ41_RS05325 (NSQ41_05325) - 1074557..1075294 (+) 738 WP_311067038.1 hypothetical protein -
  NSQ41_RS05330 (NSQ41_05330) - 1075434..1076282 (+) 849 WP_327873811.1 hypothetical protein -
  NSQ41_RS05335 (NSQ41_05335) med 1076557..1077507 (+) 951 WP_339199146.1 BMP family ABC transporter substrate-binding protein Regulator
  NSQ41_RS05340 (NSQ41_05340) - 1077563..1077835 (-) 273 WP_063387009.1 hypothetical protein -
  NSQ41_RS05345 (NSQ41_05345) - 1078049..1078981 (+) 933 WP_063387008.1 beta-ketoacyl-ACP synthase III -
  NSQ41_RS05350 (NSQ41_05350) fabF 1079051..1080295 (+) 1245 WP_063387007.1 beta-ketoacyl-ACP synthase II -
  NSQ41_RS05355 (NSQ41_05355) - 1081069..1081848 (+) 780 WP_339211158.1 DUF2268 domain-containing protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35588.79 Da        Isoelectric Point: 4.8537

>NTDB_id=964780 NSQ41_RS05335 WP_339199146.1 1076557..1077507(+) (med) [Aeribacillus sp. FSL K6-8210]
MYKKMFVIIFILLFLVGCGQASEKGKLKKVGLLVPETINDQVWGTKGYKGLLKIQSELNVDVFYKEGMNSEAAVREAVEE
FHGKGVNLIIGHGHEYEGFFRDLLDLYPDIHFVFFNGDAKGPNATSLNFEAHAMGFFAGMVAAHMTKTNEIGIIAAFEWQ
PEVEGFYQGAQFENPNVTIHIEYVQGFDHIDLALEKLDKLVAENVDVVYPAGDRYNVPVIEKVKEKGIYSIGFVSDQSDL
GEQMVLTSTVQHVDELYLLVAKKFIKGELESGNLYFDFQDGVIDLGKFSPLVDKEFKNKVLKYVEEYKKTGKLPNE

Nucleotide


Download         Length: 951 bp        

>NTDB_id=964780 NSQ41_RS05335 WP_339199146.1 1076557..1077507(+) (med) [Aeribacillus sp. FSL K6-8210]
ATGTATAAAAAAATGTTTGTGATCATTTTTATTTTATTATTTCTCGTTGGCTGCGGACAAGCATCAGAAAAAGGAAAACT
GAAAAAGGTGGGTTTGCTCGTTCCTGAAACGATTAATGATCAAGTTTGGGGGACAAAAGGGTATAAAGGGCTGTTAAAAA
TTCAGTCTGAGCTGAATGTAGATGTTTTTTATAAAGAAGGAATGAATTCCGAAGCGGCGGTGAGGGAGGCGGTCGAAGAA
TTTCACGGAAAGGGAGTTAATTTAATTATCGGGCACGGTCACGAATATGAGGGTTTTTTTAGAGATTTGCTGGATCTATA
TCCAGATATTCATTTCGTTTTTTTTAATGGTGATGCAAAAGGCCCGAATGCCACAAGTTTAAATTTTGAGGCGCATGCCA
TGGGCTTTTTCGCAGGAATGGTGGCAGCACATATGACAAAAACAAACGAAATCGGAATTATTGCCGCTTTTGAGTGGCAG
CCTGAAGTGGAGGGGTTTTATCAAGGGGCGCAATTTGAAAATCCAAACGTAACCATTCACATTGAATATGTCCAAGGGTT
TGATCATATTGACTTGGCGCTTGAGAAGCTCGATAAGCTTGTCGCAGAAAATGTAGATGTTGTTTATCCGGCAGGCGACA
GATACAACGTGCCAGTGATCGAAAAAGTGAAGGAAAAAGGAATATATTCAATTGGCTTTGTTTCAGATCAAAGTGATTTG
GGCGAACAAATGGTTTTAACAAGCACAGTACAGCATGTGGATGAGTTGTATTTATTAGTCGCAAAAAAATTTATAAAAGG
CGAACTGGAAAGCGGGAATTTATATTTTGATTTTCAAGATGGTGTGATTGATTTAGGGAAGTTCAGCCCTCTAGTAGATA
AAGAATTTAAAAATAAAGTTTTAAAATATGTGGAAGAATATAAGAAAACAGGGAAATTGCCTAACGAATAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-314)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.503

99.367

0.532

Multiple sequence alignment