Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSQ24_RS02670 Genome accession   NZ_CP150171
Coordinates   464534..465487 (+) Length   317 a.a.
NCBI ID   WP_003392809.1    Uniprot ID   M8D1G8
Organism   Brevibacillus sp. FSL L8-0520     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 459534..470487
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ24_RS02645 (NSQ24_02645) - 459818..461197 (-) 1380 WP_122958027.1 PLP-dependent aminotransferase family protein -
  NSQ24_RS02650 (NSQ24_02650) - 461332..462276 (+) 945 WP_122958028.1 DMT family transporter -
  NSQ24_RS02655 (NSQ24_02655) - 462551..462838 (+) 288 WP_003392817.1 HesB/YadR/YfhF family protein -
  NSQ24_RS02660 (NSQ24_02660) - 463284..463673 (+) 390 WP_339168007.1 MFS transporter -
  NSQ24_RS02665 (NSQ24_02665) - 463743..464291 (+) 549 WP_003392811.1 NADPH-dependent FMN reductase -
  NSQ24_RS02670 (NSQ24_02670) ceuB 464534..465487 (+) 954 WP_003392809.1 ABC transporter permease Machinery gene
  NSQ24_RS02675 (NSQ24_02675) - 465477..466427 (+) 951 WP_003392805.1 iron chelate uptake ABC transporter family permease subunit -
  NSQ24_RS02680 (NSQ24_02680) - 466421..467179 (+) 759 WP_003392803.1 ABC transporter ATP-binding protein -
  NSQ24_RS02685 (NSQ24_02685) - 467308..468303 (+) 996 WP_024984291.1 siderophore ABC transporter substrate-binding protein -
  NSQ24_RS02690 (NSQ24_02690) - 468467..468964 (+) 498 WP_227278001.1 hypothetical protein -
  NSQ24_RS02695 (NSQ24_02695) - 469132..469452 (-) 321 WP_024984293.1 hypothetical protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35049.30 Da        Isoelectric Point: 9.8221

>NTDB_id=964732 NSQ24_RS02670 WP_003392809.1 464534..465487(+) (ceuB) [Brevibacillus sp. FSL L8-0520]
MKIGYLFLALLLFSFGSVFIGVKDISPLDVFQLTDDQVEILLVSRLPRLISIIIAGVSMSICGLIMQQLSRNKFVSPTTA
GTLDSARLGILVSLMLFTTASPLVKMLISFVFALLGTFVFMRILEKIKYKDTIFIPLVGLMFGNIISSFATFIAYKYDLI
QNMSAWLQGDFSMIMKGRYELMYISIPLLVIAYLYANKFTIAGMGEDFSKNLGLNYRRVVNIGLVIVALVTASVVLTVGM
IPFLGLIIPNIVSIYRGDNLKNSLSHTALLGAVFVLFCDILGRVIIYPYEISISLTVGVLGSGIFAYLLMRRKAYGI

Nucleotide


Download         Length: 954 bp        

>NTDB_id=964732 NSQ24_RS02670 WP_003392809.1 464534..465487(+) (ceuB) [Brevibacillus sp. FSL L8-0520]
ATGAAAATCGGATATTTGTTTCTTGCACTGCTTCTATTCTCATTCGGGTCTGTCTTTATCGGTGTAAAGGACATTTCCCC
GCTGGATGTATTCCAGCTGACAGACGACCAGGTCGAAATACTGCTCGTGAGCAGGCTTCCCCGTCTGATCAGCATTATTA
TTGCAGGCGTCAGCATGAGTATTTGCGGTCTGATCATGCAGCAGCTAAGCCGGAATAAATTTGTTTCTCCCACGACAGCA
GGGACGCTAGATTCCGCCAGATTGGGGATTCTCGTATCGCTGATGCTGTTTACCACGGCAAGTCCGTTGGTCAAGATGCT
GATTTCTTTCGTCTTTGCCTTGCTGGGCACTTTTGTGTTCATGAGAATCCTGGAGAAGATCAAGTACAAGGATACGATCT
TCATCCCGCTCGTCGGACTGATGTTCGGGAACATCATCAGCTCCTTCGCTACCTTTATCGCGTATAAGTACGACCTGATC
CAGAACATGTCGGCATGGCTGCAGGGCGATTTTTCCATGATCATGAAAGGGCGCTACGAGCTGATGTACATCAGCATTCC
GCTGCTTGTTATCGCATACCTGTACGCCAACAAATTTACGATAGCCGGGATGGGCGAGGACTTTTCCAAGAATTTGGGCC
TGAATTACAGGCGGGTGGTCAACATTGGATTGGTGATTGTTGCCCTGGTCACCGCGTCCGTCGTGTTGACTGTGGGGATG
ATTCCGTTTCTGGGCCTGATCATCCCGAACATCGTTTCGATCTATCGTGGCGACAACCTGAAAAACAGCCTTTCTCATAC
CGCTTTATTGGGAGCCGTATTCGTACTCTTCTGCGACATCCTTGGCCGGGTCATCATCTACCCATACGAAATTTCCATCA
GCCTGACCGTCGGGGTGCTCGGAAGTGGTATCTTTGCTTATTTACTGATGAGGAGAAAGGCATATGGCATATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB M8D1G8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

55.949

98.107

0.549

Multiple sequence alignment