Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NSS67_RS07165 Genome accession   NZ_CP150170
Coordinates   1593985..1595742 (-) Length   585 a.a.
NCBI ID   WP_339318910.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL R10-2734     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1588985..1600742
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSS67_RS07155 (NSS67_07155) - 1590539..1591492 (+) 954 WP_339318908.1 DMT family transporter -
  NSS67_RS07160 (NSS67_07160) rcrQ 1592222..1593985 (-) 1764 WP_339318909.1 ABC transporter ATP-binding protein Regulator
  NSS67_RS07165 (NSS67_07165) rcrP 1593985..1595742 (-) 1758 WP_339318910.1 ABC transporter ATP-binding protein Regulator
  NSS67_RS07170 (NSS67_07170) - 1595905..1596396 (-) 492 WP_339318911.1 GNAT family N-acetyltransferase -
  NSS67_RS07175 (NSS67_07175) - 1596393..1597472 (-) 1080 WP_339318912.1 HAMP domain-containing sensor histidine kinase -
  NSS67_RS07180 (NSS67_07180) - 1597469..1598140 (-) 672 WP_339318913.1 response regulator transcription factor -
  NSS67_RS07185 (NSS67_07185) - 1598587..1598859 (+) 273 WP_339320524.1 transposase zinc-binding domain-containing protein -
  NSS67_RS07190 (NSS67_07190) - 1599276..1600199 (+) 924 WP_339318914.1 ABC transporter permease subunit -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64281.75 Da        Isoelectric Point: 5.1652

>NTDB_id=964711 NSS67_RS07165 WP_339318910.1 1593985..1595742(-) (rcrP) [Paenibacillus sp. FSL R10-2734]
MLKILKNLEPKEWFLFGISLMFIIAQVWLDLELPDYMSDVTRLIQTPGSEMNEILVAGGWMLLCALGSLATSIVVAGIAS
KIAADLSARLRSKLFDKVQSFSMEEISNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWAILKISGKSWEWTLT
TGAAVALLVLIVAVCIVLVLPKFKKLQLLTDNLNRVSRENLNGLRVIRAYNAEDYQEQKFAGANNELTSTNLFANNVMTI
LMPSITLIMSGLSLAIYWVGAVLIQAAEGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILLPRAQVSAKRINEVLETV
PSLKNGSVTQFPVKRKDELEFKGVSFKYPDAEDYVLENISFTAKQGETVAFIGSTGCGKSTLVNLIPRFYDATEGEVLVN
GINVKEYDQQALRNKMGYVSQKAVLFGGTVTSNIAFGENGSGQVLSSDIVDAVYTSQSSEFVEKLEGNYEAHIAQGGANL
SGGQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKDAHDSTMLIVAQRIGTIKDADKIIVLEAGSIVGIGT
HDELMQSCDVYQEIAYSQLTKEELA

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=964711 NSS67_RS07165 WP_339318910.1 1593985..1595742(-) (rcrP) [Paenibacillus sp. FSL R10-2734]
ATGTTGAAAATACTCAAGAATCTGGAACCCAAAGAATGGTTCTTATTCGGCATCAGCCTCATGTTTATTATCGCTCAGGT
CTGGCTGGACTTGGAATTGCCTGACTACATGAGTGATGTTACCCGGCTGATCCAAACACCAGGAAGCGAAATGAATGAAA
TCCTTGTTGCAGGAGGCTGGATGCTGCTCTGTGCACTTGGCAGTCTGGCAACCTCAATTGTTGTAGCGGGCATTGCTTCG
AAAATAGCAGCCGACTTGTCTGCAAGATTGCGTTCCAAATTGTTCGATAAGGTACAATCCTTTTCGATGGAGGAGATCAG
CAACTTCTCAACAGCAAGTCTGATTACCCGTTCCACGAATGACATCACACAAGTACAAATGCTGATTGTGATTGGTTTAC
AGCTACTAGTGAAAGCTCCCATACTTGCTGTGTGGGCAATCCTCAAGATCTCAGGAAAAAGCTGGGAGTGGACGCTTACG
ACAGGCGCCGCGGTCGCCCTGCTAGTGCTTATTGTTGCAGTCTGCATCGTGCTCGTCCTGCCTAAATTTAAAAAGCTGCA
GCTGTTAACTGACAATCTGAATCGTGTATCCAGAGAGAATCTTAACGGTCTTCGTGTCATCCGGGCTTACAATGCCGAGG
ACTATCAGGAACAAAAGTTCGCTGGAGCTAACAACGAGCTTACCAGTACCAACCTATTCGCTAACAATGTAATGACCATA
TTGATGCCAAGTATTACTTTGATTATGAGTGGACTCAGTCTCGCCATCTATTGGGTGGGTGCAGTGCTCATTCAAGCAGC
CGAGGGTACTGCCAAGATGGGTTTGTTCTCAGATATGATCGTATTCTCTTCTTATGCCATGCAAGTGGTTATGGCCTTTA
TGATGCTGATTATGATCTTTATCTTACTACCCCGCGCTCAAGTATCGGCTAAACGAATCAATGAAGTGCTAGAAACAGTA
CCTAGCTTGAAGAACGGATCAGTCACTCAATTCCCTGTGAAGAGAAAAGATGAGCTTGAATTCAAGGGGGTTAGCTTCAA
ATATCCAGATGCAGAGGATTATGTGCTGGAGAACATCAGCTTCACGGCGAAACAGGGGGAGACGGTTGCTTTTATCGGAT
CAACAGGCTGCGGGAAAAGTACACTTGTTAACCTCATTCCCCGTTTCTATGATGCTACAGAAGGCGAAGTGCTAGTAAAT
GGCATCAATGTCAAAGAATACGACCAGCAAGCGCTGCGGAATAAAATGGGTTATGTCTCTCAGAAGGCTGTTTTGTTTGG
CGGAACAGTGACCTCCAATATTGCCTTTGGTGAGAACGGCTCTGGTCAGGTTCTCAGTTCAGATATTGTTGATGCGGTGT
ACACTTCCCAATCCTCTGAATTTGTAGAAAAGCTAGAGGGGAATTATGAGGCCCACATTGCCCAAGGCGGAGCAAATCTG
TCTGGCGGACAAAAACAGCGGCTGTCGATTGCCAGAGCGATTGCCCGGCGTCCAGAAATATTAATCTTTGACGATTCTTT
CTCAGCACTTGATTATAAGACTGACCGCAAACTGCGCAGTGAGCTGAAAAAAGACGCTCATGATTCAACGATGCTGATCG
TTGCACAGCGTATTGGTACGATCAAAGACGCTGACAAAATCATTGTTCTGGAAGCCGGAAGCATCGTCGGTATCGGAACA
CATGACGAATTAATGCAATCCTGCGACGTTTATCAGGAAATTGCTTATTCTCAGCTGACGAAGGAGGAGCTCGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(18-293)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.349

100

0.533

Multiple sequence alignment