Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | NST31_RS20205 | Genome accession | NZ_CP150169 |
| Coordinates | 4303227..4304339 (+) | Length | 370 a.a. |
| NCBI ID | WP_205178679.1 | Uniprot ID | - |
| Organism | Siminovitchia sp. FSL W7-1587 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4298227..4309339
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NST31_RS20190 (NST31_20190) | - | 4301453..4301620 (-) | 168 | WP_077111393.1 | DUF2759 domain-containing protein | - |
| NST31_RS20195 (NST31_20195) | - | 4301850..4302476 (+) | 627 | WP_205178681.1 | MBL fold metallo-hydrolase | - |
| NST31_RS20200 (NST31_20200) | - | 4302523..4302768 (-) | 246 | WP_077111389.1 | DUF2626 domain-containing protein | - |
| NST31_RS20205 (NST31_20205) | comGA | 4303227..4304339 (+) | 1113 | WP_205178679.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| NST31_RS20210 (NST31_20210) | comGB | 4304239..4305309 (+) | 1071 | WP_205178677.1 | competence type IV pilus assembly protein ComGB | - |
| NST31_RS20215 (NST31_20215) | comGC | 4305325..4305645 (+) | 321 | WP_077111384.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| NST31_RS20220 (NST31_20220) | comGD | 4305647..4306090 (+) | 444 | WP_268920949.1 | competence type IV pilus minor pilin ComGD | - |
| NST31_RS20225 (NST31_20225) | - | 4306077..4306385 (+) | 309 | WP_205178673.1 | type II secretion system GspH family protein | - |
| NST31_RS20230 (NST31_20230) | comGF | 4306354..4306809 (+) | 456 | WP_077111379.1 | competence type IV pilus minor pilin ComGF | - |
| NST31_RS20235 (NST31_20235) | - | 4306809..4306994 (+) | 186 | WP_205178671.1 | hypothetical protein | - |
| NST31_RS20240 (NST31_20240) | - | 4307165..4307350 (+) | 186 | WP_077111377.1 | YqzE family protein | - |
| NST31_RS20245 (NST31_20245) | - | 4307355..4308146 (-) | 792 | WP_205178669.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 370 a.a. Molecular weight: 41672.63 Da Isoelectric Point: 10.0559
>NTDB_id=964686 NST31_RS20205 WP_205178679.1 4303227..4304339(+) (comGA) [Siminovitchia sp. FSL W7-1587]
MSIERTADELISLAARLGVTDVHIVPRRKDYLIKFRLHGHLIPRKPIPPIAGERLISHLKFMASMDISEKRKPQSGAWQT
HCHGKQISLRISTLPTALSKESLVIRIIPQKQSFSLEKMSLFPKSIQQLYSMMSLSHGMIIFSGPTGSGKTTAIYKLAEY
SCKRVQRNMITLEDPVESQSDLFLQVQVNEKAGITYHTGLKAILRHDPDMIFIGEIRDAETAKIAIRAAMTGHLVLTSMH
TRNAEGAVDRLLEFGVNPLEIEQTVIGVAAQRLVSLLCPYCKGRCSEFCRRDGFPKRTAVFDVVNGEMLQTMIKTAKKGG
RVRRSRNLESMIRKGIALGYISCEEYDRWVVEEKQEAASERTGNLFKSYL
MSIERTADELISLAARLGVTDVHIVPRRKDYLIKFRLHGHLIPRKPIPPIAGERLISHLKFMASMDISEKRKPQSGAWQT
HCHGKQISLRISTLPTALSKESLVIRIIPQKQSFSLEKMSLFPKSIQQLYSMMSLSHGMIIFSGPTGSGKTTAIYKLAEY
SCKRVQRNMITLEDPVESQSDLFLQVQVNEKAGITYHTGLKAILRHDPDMIFIGEIRDAETAKIAIRAAMTGHLVLTSMH
TRNAEGAVDRLLEFGVNPLEIEQTVIGVAAQRLVSLLCPYCKGRCSEFCRRDGFPKRTAVFDVVNGEMLQTMIKTAKKGG
RVRRSRNLESMIRKGIALGYISCEEYDRWVVEEKQEAASERTGNLFKSYL
Nucleotide
Download Length: 1113 bp
>NTDB_id=964686 NST31_RS20205 WP_205178679.1 4303227..4304339(+) (comGA) [Siminovitchia sp. FSL W7-1587]
ATGTCCATTGAGCGTACAGCCGACGAGCTTATTTCACTGGCAGCCAGGCTGGGCGTGACGGATGTACACATTGTTCCCCG
GAGGAAGGATTACTTGATCAAATTTCGCCTCCACGGTCATCTGATACCGCGTAAACCGATTCCCCCCATAGCCGGAGAAC
GGCTCATTTCCCATTTAAAGTTCATGGCTTCCATGGATATAAGCGAAAAACGAAAACCGCAAAGCGGCGCATGGCAGACT
CACTGCCATGGGAAACAGATTTCGCTTCGCATTTCTACCCTTCCAACCGCCCTTTCAAAGGAAAGCTTGGTTATTCGTAT
CATCCCCCAAAAACAGTCATTTTCACTCGAAAAAATGTCATTGTTTCCAAAGAGCATTCAACAACTGTATTCAATGATGT
CTTTGTCACACGGCATGATCATCTTTAGTGGACCGACAGGCAGTGGAAAGACCACGGCCATTTATAAGTTGGCGGAATAT
AGCTGCAAGAGAGTACAGAGAAATATGATTACTTTGGAAGATCCCGTAGAAAGTCAAAGCGATCTTTTTCTTCAGGTTCA
GGTAAATGAAAAAGCGGGAATTACTTATCACACCGGGCTGAAGGCTATTTTGCGCCATGATCCCGATATGATCTTTATCG
GTGAGATTCGCGATGCGGAAACAGCCAAGATCGCCATTCGTGCTGCCATGACAGGCCATCTTGTCCTCACGAGCATGCAT
ACAAGAAATGCAGAGGGCGCTGTTGATCGTCTATTGGAATTTGGTGTAAATCCTTTGGAAATTGAACAGACGGTTATTGG
GGTGGCGGCCCAAAGGCTTGTCTCTCTTTTATGCCCGTATTGTAAGGGGAGGTGCTCTGAATTTTGCAGGCGGGACGGAT
TCCCGAAAAGGACGGCCGTATTCGATGTAGTCAATGGCGAAATGCTGCAGACAATGATCAAAACGGCCAAAAAAGGGGGG
AGGGTAAGACGGTCAAGAAACTTAGAAAGTATGATTAGAAAGGGGATTGCGCTTGGCTACATTTCTTGTGAGGAATATGA
TCGTTGGGTCGTTGAAGAGAAGCAAGAAGCTGCGTCTGAAAGAACAGGGAATCTTTTTAAATCGTATCTCTGA
ATGTCCATTGAGCGTACAGCCGACGAGCTTATTTCACTGGCAGCCAGGCTGGGCGTGACGGATGTACACATTGTTCCCCG
GAGGAAGGATTACTTGATCAAATTTCGCCTCCACGGTCATCTGATACCGCGTAAACCGATTCCCCCCATAGCCGGAGAAC
GGCTCATTTCCCATTTAAAGTTCATGGCTTCCATGGATATAAGCGAAAAACGAAAACCGCAAAGCGGCGCATGGCAGACT
CACTGCCATGGGAAACAGATTTCGCTTCGCATTTCTACCCTTCCAACCGCCCTTTCAAAGGAAAGCTTGGTTATTCGTAT
CATCCCCCAAAAACAGTCATTTTCACTCGAAAAAATGTCATTGTTTCCAAAGAGCATTCAACAACTGTATTCAATGATGT
CTTTGTCACACGGCATGATCATCTTTAGTGGACCGACAGGCAGTGGAAAGACCACGGCCATTTATAAGTTGGCGGAATAT
AGCTGCAAGAGAGTACAGAGAAATATGATTACTTTGGAAGATCCCGTAGAAAGTCAAAGCGATCTTTTTCTTCAGGTTCA
GGTAAATGAAAAAGCGGGAATTACTTATCACACCGGGCTGAAGGCTATTTTGCGCCATGATCCCGATATGATCTTTATCG
GTGAGATTCGCGATGCGGAAACAGCCAAGATCGCCATTCGTGCTGCCATGACAGGCCATCTTGTCCTCACGAGCATGCAT
ACAAGAAATGCAGAGGGCGCTGTTGATCGTCTATTGGAATTTGGTGTAAATCCTTTGGAAATTGAACAGACGGTTATTGG
GGTGGCGGCCCAAAGGCTTGTCTCTCTTTTATGCCCGTATTGTAAGGGGAGGTGCTCTGAATTTTGCAGGCGGGACGGAT
TCCCGAAAAGGACGGCCGTATTCGATGTAGTCAATGGCGAAATGCTGCAGACAATGATCAAAACGGCCAAAAAAGGGGGG
AGGGTAAGACGGTCAAGAAACTTAGAAAGTATGATTAGAAAGGGGATTGCGCTTGGCTACATTTCTTGTGAGGAATATGA
TCGTTGGGTCGTTGAAGAGAAGCAAGAAGCTGCGTCTGAAAGAACAGGGAATCTTTTTAAATCGTATCTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
54.237 |
95.676 |
0.519 |