Detailed information NTG0964640

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: NYE79_RS09755
• Genome accession: NZ_CP150168
• Coordinates: 1991538..1993970 (-)
• Length: 810 a.a.
• NCBI ID: WP_251464123.1
• Uniprot ID: -
• Organism: Streptococcus sp. FSL W8-0197
• Function: degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 1986538..1998970

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NYE79_RS09730 (NYE79_09730)	dusB	1986748..1987728 (+)	981	WP_216728656.1	tRNA dihydrouridine synthase DusB	-
NYE79_RS09735 (NYE79_09735)	-	1987794..1988477 (-)	684	WP_216728657.1	hypothetical protein	-
NYE79_RS09740 (NYE79_09740)	-	1988770..1989543 (-)	774	WP_216728658.1	NUDIX hydrolase	-
NYE79_RS09745 (NYE79_09745)	pnuC	1989545..1990324 (-)	780	WP_216728659.1	nicotinamide riboside transporter PnuC	-
NYE79_RS09750 (NYE79_09750)	-	1990334..1991392 (-)	1059	WP_216728660.1	AAA family ATPase	-
NYE79_RS09755 (NYE79_09755)	clpC	1991538..1993970 (-)	2433	WP_251464123.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
NYE79_RS09760 (NYE79_09760)	-	1993972..1994430 (-)	459	WP_001211262.1	CtsR family transcriptional regulator	-
NYE79_RS09765 (NYE79_09765)	-	1994602..1998375 (-)	3774	WP_216728680.1	FctA domain-containing protein	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 90268.06 Da
• Isoelectric Point: 5.9515

>NTDB_id=964640 NYE79_RS09755 WP_251464123.1 1991538..1993970(-) (clpC) [Streptococcus sp. FSL W8-0197]
MNYSKALNECIESAYMVASHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLEVLFAEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDQKDQVRIAALRRNLEERAGWTREDLKA
LRQRHRTVTDKQNSMANMMGMPQAQSGGLEDYTHDLTEQARSGKLEAVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGKVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSLADSMTILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKSKQVKADESDLSPADKALMDGKWKQAAQLIAKEQEVPVYKDLVTESEI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQDNMEKRIFEELKKAYRPEFINRIDEKVVFHSLDS
EHMQEIVKIMVKPLIASLAEKGIDLKLQASALKLLASQGYNPEMGARPLRRTLQTEVEDKLAELLLKGELVAGKTLKIGV
KAGQLKFDIA

Nucleotide

• Length: 2433 bp

>NTDB_id=964640 NYE79_RS09755 WP_251464123.1 1991538..1993970(-) (clpC) [Streptococcus sp. FSL W8-0197]
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCGAGCCATTTTGGAGCCCGTTATCTAGA
GTCTTGGCATTTATTGATTGCCATGTCCAATCACAGTTACAGTGTGGCAGGTGCGACTCTAAATGATTATCCTTATGAAA
TGGACCGTTTAGAAGAGGTTGCGTTGGAACTGACTGAAACGGACTATAGCCAAGACGAAACCTTTACGGAATTGCCCTTT
TCCCATCGTTTGGAGGTTCTCTTTGCAGAAGCAGAGTATGTGGCCTCAGTGGTCCATGCAAAGGTGCTAGGGACAGAGCA
TGTTCTCTATGCGATCTTGCATGATGGTAATGCCTTGGCAACTCGCATCTTGGAGAGAGCAGGCTTTTCTTATGAAGACC
AGAAAGATCAGGTCAGAATTGCTGCTCTTCGTCGCAATTTAGAGGAACGTGCTGGTTGGACAAGAGAAGACCTTAAGGCT
TTGCGTCAACGCCATCGCACAGTAACTGACAAGCAAAATTCCATGGCTAATATGATGGGCATGCCTCAAGCTCAAAGTGG
TGGTCTAGAGGACTACACGCATGACCTAACGGAGCAAGCGCGTTCTGGCAAGTTAGAGGCAGTTATCGGTCGCGACAAGG
AAATCTCACGTATGATTCAGATTTTGAGTCGGAAGACCAAGAACAATCCGGTCTTGGTTGGTGATGCTGGTGTCGGGAAA
ACAGCTTTAGCACTTGGGCTTGCCCAGCGTATTGCTAGTGGGGACGTACCAGCTGAAATGGCAAAGATGCGTGTTCTAGA
GCTTGATTTGATGAATGTCGTTGCGGGAACACGTTTCCGTGGAGATTTTGAAGAGCGCATGAACAATATCATCAAGGACA
TCGAGGAAGATGGCAAAGTGATCCTCTTTATCGATGAACTCCACACCATCATGGGTTCTGGTAGCGGTATTGATTCGACT
CTGGATGCAGCCAATATCTTGAAGCCAGCCTTAGCTCGTGGAACTCTGAGAACAGTTGGTGCAACCACTCAGGAAGAATA
CCAAAAACACATCGAAAAAGACGCAGCTCTTTCTCGTCGTTTTGCAAAAGTGACGATTGAAGAGCCAAGTCTAGCTGACA
GTATGACCATTTTGCAAGGTTTGAAAGCGACCTATGAGAAACACCACCGTGTGCAAATCACAGATGAAGCTGTTGAAACA
GCTGTCAAGATGGCGCATCGTTACTTGACCAGTCGTCACTTACCAGACTCTGCCATCGATCTATTGGATGAAGCGGCAGC
AACAGTGCAAAACAAATCCAAGCAAGTGAAAGCAGACGAATCCGACTTGAGTCCAGCTGACAAGGCCCTGATGGATGGCA
AGTGGAAACAAGCTGCCCAGTTAATCGCAAAAGAGCAGGAAGTCCCTGTCTATAAAGACTTAGTAACAGAATCTGAAATT
TTGACTACCTTAAGTCGCTTGTCAGGGATTCCAGTCCAAAAACTGACTCAGACTGATGCCAAGAAATATCTGAACTTGGA
AGCTGAACTACACAAACGTGTCATCGGTCAAGATCAAGCTGTTTCAAGCATTAGCCGTGCGATTCGTCGCAATCAGTCAG
GAATTCGCAGTCACAAGCGTCCGATTGGTTCCTTTATGTTCCTAGGACCAACGGGTGTCGGTAAGACCGAATTGGCCAAG
GCATTGGCAGAAGTCCTCTTTGATGACGAATCAGCCCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTCGCAGC
TAGCCGTCTCAATGGAGCCCCTCCTGGCTATGTAGGCTACGAAGAAGGTGGGGAGTTGACCGAGAAGGTTCGCAACAAAC
CTTACTCAGTGCTTCTCTTTGACGAGGTAGAGAAGGCCCATCCAGATATCTTCAATGTCCTCTTGCAAGTCTTGGACGAC
GGTGTCTTGACAGATAGCAAGGGGCGCAAGGTTGACTTTTCAAATACCATCATCATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGTGATGACAAGACAGTTGGTTTTGGGGCCAAGGACATTCGCTTTGACCAGGATAATATGGAAAAACGCATCT
TCGAAGAGTTGAAAAAAGCTTATCGACCAGAGTTTATCAACCGTATTGATGAAAAGGTGGTCTTCCACAGCTTAGACAGC
GAACACATGCAAGAAATTGTCAAGATCATGGTTAAACCATTGATTGCTAGCCTGGCAGAGAAGGGTATCGACTTGAAACT
ACAAGCTTCGGCACTGAAGTTACTAGCTAGTCAAGGCTACAATCCAGAAATGGGTGCCCGTCCACTTCGCAGAACACTGC
AAACAGAGGTGGAAGACAAGTTGGCAGAACTCCTTCTTAAGGGGGAACTGGTAGCAGGCAAGACCCTCAAGATTGGTGTC
AAAGCTGGTCAATTAAAATTTGATATTGCTTAA

Domains

Predicted by InterproScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (231-362)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (718-797)

• AAA lid domain (AAA_lid_9) (371-446)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (103-133)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (14-49)

• AAA domain (Cdc48 subfamily) (AAA_2) (540-711)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus pneumoniae Rx1	96.42	100	0.964
clpC	Streptococcus pneumoniae D39	96.42	100	0.964
clpC	Streptococcus pneumoniae TIGR4	96.42	100	0.964
clpC	Streptococcus mutans UA159	67.405	100	0.677
clpC	Streptococcus thermophilus LMD-9	66.953	100	0.673
clpC	Streptococcus thermophilus LMG 18311	66.83	100	0.672
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	49.455	100	0.504
clpC	Bacillus subtilis subsp. subtilis str. 168	44.581	100	0.447
clpE	Streptococcus mutans UA159	48.387	76.543	0.37