Detailed information    

insolico Bioinformatically predicted

Overview

Name   HI0659   Type   Machinery gene
Locus tag   NYE79_RS07905 Genome accession   NZ_CP150168
Coordinates   1577879..1578172 (-) Length   97 a.a.
NCBI ID   WP_101800194.1    Uniprot ID   -
Organism   Streptococcus sp. FSL W8-0197     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1572879..1583172
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE79_RS07895 (NYE79_07895) metF 1574408..1575274 (-) 867 WP_025168823.1 methylenetetrahydrofolate reductase [NAD(P)H] -
  NYE79_RS07900 (NYE79_07900) metE 1575369..1577618 (-) 2250 WP_200370312.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  NYE79_RS07905 (NYE79_07905) HI0659 1577879..1578172 (-) 294 WP_101800194.1 helix-turn-helix transcriptional regulator Machinery gene
  NYE79_RS07910 (NYE79_07910) - 1578162..1578528 (-) 367 Protein_1508 type II toxin-antitoxin system RelE/ParE family toxin -
  NYE79_RS07915 (NYE79_07915) - 1578685..1579050 (-) 366 WP_101800195.1 TIGR02328 family protein -
  NYE79_RS07920 (NYE79_07920) - 1579034..1579438 (-) 405 WP_101800276.1 YbgA family protein -
  NYE79_RS07925 (NYE79_07925) - 1579458..1579730 (-) 273 Protein_1511 HigA family addiction module antitoxin -
  NYE79_RS07930 (NYE79_07930) - 1580094..1580753 (-) 660 WP_200370316.1 phospholipase D-like domain-containing protein -
  NYE79_RS07935 (NYE79_07935) - 1580735..1582492 (-) 1758 WP_200370318.1 DUF1998 domain-containing protein -

Sequence

Protein


Download         Length: 97 a.a.        Molecular weight: 10786.43 Da        Isoelectric Point: 5.1991

>NTDB_id=964622 NYE79_RS07905 WP_101800194.1 1577879..1578172(-) (HI0659) [Streptococcus sp. FSL W8-0197]
MKNSAIGSNWKDIRSELFTKEEIFESDMRVAIMSELIEARHEQGISQKKLEELSGVSQPVIARMETGKTSPQLDTVLKVL
ASLGKTLAVVPLEQEKS

Nucleotide


Download         Length: 294 bp        

>NTDB_id=964622 NYE79_RS07905 WP_101800194.1 1577879..1578172(-) (HI0659) [Streptococcus sp. FSL W8-0197]
ATGAAAAATAGCGCCATTGGGAGTAATTGGAAAGATATCCGATCTGAACTCTTTACCAAGGAGGAAATCTTTGAAAGTGA
TATGCGAGTGGCTATCATGAGTGAGTTGATAGAAGCTAGACATGAGCAAGGTATCAGTCAGAAAAAACTAGAAGAACTCA
GTGGAGTGAGCCAGCCTGTTATAGCTAGGATGGAGACAGGAAAGACCAGTCCTCAGTTGGATACGGTCTTAAAAGTCTTA
GCCAGTTTAGGAAAGACACTAGCAGTCGTACCACTTGAACAGGAAAAAAGTTGA

Domains

Predicted by InterproScan.

Helix-turn-helix (HTH_3)

(37-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  HI0659 Haemophilus influenzae Rd KW20

59.341

93.814

0.557

Multiple sequence alignment