Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   NYE66_RS11150 Genome accession   NZ_CP150167
Coordinates   2120650..2122371 (-) Length   573 a.a.
NCBI ID   WP_033009423.1    Uniprot ID   Q75TG1
Organism   Geobacillus sp. FSL W8-0466     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2115650..2127371
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NYE66_RS11120 (NYE66_11120) - 2116231..2116494 (-) 264 WP_230581370.1 hypothetical protein -
  NYE66_RS11125 (NYE66_11125) - 2116669..2116917 (+) 249 WP_033009427.1 DUF2627 domain-containing protein -
  NYE66_RS11130 (NYE66_11130) - 2116976..2117704 (-) 729 WP_033009425.1 glycerophosphodiester phosphodiesterase -
  NYE66_RS11135 (NYE66_11135) - 2117815..2117967 (+) 153 WP_064502501.1 YycC family protein -
  NYE66_RS11140 (NYE66_11140) spo0A 2118096..2118875 (-) 780 WP_033016446.1 sporulation transcription factor Spo0A -
  NYE66_RS11145 (NYE66_11145) spoIVB 2119166..2120461 (-) 1296 WP_080986151.1 SpoIVB peptidase -
  NYE66_RS11150 (NYE66_11150) recN 2120650..2122371 (-) 1722 WP_033009423.1 DNA repair protein RecN Machinery gene
  NYE66_RS11155 (NYE66_11155) argR 2122513..2122962 (-) 450 WP_033016443.1 transcriptional regulator ArgR -
  NYE66_RS11160 (NYE66_11160) - 2123043..2123891 (-) 849 WP_033009419.1 TlyA family RNA methyltransferase -
  NYE66_RS11165 (NYE66_11165) dxs 2123896..2125788 (-) 1893 WP_049624620.1 1-deoxy-D-xylulose-5-phosphate synthase -
  NYE66_RS11170 (NYE66_11170) - 2125859..2126014 (+) 156 WP_155266802.1 hypothetical protein -
  NYE66_RS11175 (NYE66_11175) - 2126011..2126904 (-) 894 WP_049624621.1 polyprenyl synthetase family protein -
  NYE66_RS11180 (NYE66_11180) - 2126908..2127138 (-) 231 WP_049624622.1 exodeoxyribonuclease VII small subunit -

Sequence

Protein


Download         Length: 573 a.a.        Molecular weight: 63949.42 Da        Isoelectric Point: 4.9166

>NTDB_id=964554 NYE66_RS11150 WP_033009423.1 2120650..2122371(-) (recN) [Geobacillus sp. FSL W8-0466]
MLAELSIKNFAIIESLSLSFDKGLTVLTGETGAGKSIIIDAIHLLIGGRGSSEFVRFGAEKAEIEGLFLLDDDRHPCCQK
CADIGVDVSDGMVVLRRDILASGKSICRINGKLVTTAVLRDIGSTLVDIHGQHEHQELMDPSRHLPLLDEFGGAETAAAL
ARYRALYEEREALVKKLKKLSENEQQMAHRLDLLTFQLREIEQAGLEIGEDERLMEEKVRIVNFQKIYQAIQHSYEALAG
EGRGLDSVGQAMGHLEDVAAMDAELKEAHEMVANSYYLLEEVMYRLRDQLEELEYDPMRLDAIESRLAEIQQLKRKYGAT
IADILQYAEAIAEEIETIENRDMHVHDLERQLADVTGKLLAEAKKVTSIRQAYARQLIERIQQELKDLYMEKTQFDIVFA
KREGPLDAPLVDGVPVKFAEDGIDVVEFYLSTNVGEPLKPLAKTASGGELSRIMLALKTIFSKHQGVTSIIFDEVDTGVS
GRVAQAIAEKIYRIASQSQVLCISHLPQVAAMADTHLLIVKETDGTRTKTAVKKLDEEEKVKEIGRMISGVEMTELTKQH
AKELLELAAKMKR

Nucleotide


Download         Length: 1722 bp        

>NTDB_id=964554 NYE66_RS11150 WP_033009423.1 2120650..2122371(-) (recN) [Geobacillus sp. FSL W8-0466]
ATGCTCGCTGAACTGTCGATTAAAAATTTCGCGATTATCGAATCGCTCTCGTTGTCGTTTGATAAAGGGCTGACGGTGTT
GACGGGCGAAACAGGGGCCGGCAAGTCGATCATCATCGACGCCATTCATTTGCTCATCGGCGGGCGCGGTTCGTCTGAGT
TCGTCCGTTTCGGCGCAGAGAAGGCCGAAATCGAAGGGCTGTTTTTGCTTGATGACGACCGCCATCCATGCTGCCAAAAA
TGTGCGGACATTGGCGTTGATGTCAGCGATGGGATGGTGGTGCTCCGCCGCGACATTTTGGCGAGCGGCAAAAGCATCTG
CCGCATCAACGGCAAGCTCGTCACCACCGCCGTGCTGCGCGACATCGGTTCGACGCTCGTCGATATTCACGGTCAGCATG
AGCATCAAGAGCTGATGGATCCATCCCGCCATCTGCCGCTTCTCGATGAGTTTGGCGGCGCGGAAACGGCGGCAGCGCTG
GCGCGTTATCGCGCTCTGTATGAAGAGCGTGAAGCGTTGGTAAAAAAGTTGAAAAAGCTGAGTGAAAATGAGCAGCAAAT
GGCGCATCGGCTTGATTTGTTGACGTTTCAGCTGCGCGAAATCGAACAAGCCGGGCTCGAGATTGGCGAAGACGAGCGGC
TGATGGAAGAAAAAGTGCGGATTGTGAATTTCCAAAAAATTTATCAAGCCATTCAGCATAGCTACGAAGCGCTCGCCGGC
GAAGGACGCGGCTTGGATTCGGTCGGCCAGGCGATGGGCCATCTCGAGGACGTCGCTGCGATGGACGCGGAACTTAAAGA
GGCGCATGAAATGGTGGCCAACAGCTACTATTTGCTCGAGGAAGTCATGTATAGGCTGCGCGACCAACTTGAGGAGCTTG
AATACGACCCGATGCGGCTTGACGCCATTGAAAGCCGCCTCGCGGAAATCCAGCAATTAAAACGGAAGTACGGAGCGACG
ATCGCCGATATTTTGCAGTATGCCGAAGCGATCGCCGAAGAAATCGAGACGATTGAAAACCGCGACATGCATGTGCACGA
CCTCGAGCGGCAGCTTGCCGACGTGACCGGCAAATTGCTTGCCGAGGCGAAAAAGGTGACCAGCATCCGCCAGGCGTACG
CCCGGCAGCTGATTGAGCGCATTCAGCAAGAATTGAAAGATTTGTACATGGAAAAAACGCAGTTTGACATCGTCTTCGCC
AAACGCGAAGGTCCGCTCGACGCCCCGCTGGTCGACGGCGTGCCGGTCAAATTTGCGGAAGACGGCATCGATGTTGTCGA
ATTTTACCTGTCGACGAACGTCGGCGAGCCGCTGAAGCCGCTTGCCAAAACTGCTTCAGGCGGCGAGCTGTCGCGCATTA
TGCTCGCATTGAAGACGATTTTTTCGAAACACCAAGGCGTGACATCGATTATTTTTGATGAAGTCGACACCGGCGTCAGC
GGCCGGGTCGCCCAGGCGATCGCCGAAAAAATTTACCGCATCGCCAGCCAGTCGCAAGTGCTTTGCATTTCCCACCTGCC
GCAAGTCGCCGCCATGGCGGACACGCATCTGTTGATCGTGAAGGAAACGGACGGAACGCGGACCAAAACGGCCGTGAAAA
AGCTCGATGAGGAGGAGAAGGTGAAGGAAATCGGACGGATGATTTCCGGCGTGGAGATGACCGAACTGACGAAGCAGCAT
GCCAAAGAGCTGCTCGAGCTGGCGGCGAAAATGAAGCGATAG

Domains

Predicted by InterproScan.

RecF/RecN/SMC N terminal domain (SMC_N)

(1-526)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q75TG1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

61.847

100

0.62

Multiple sequence alignment