Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NSU02_RS17140 Genome accession   NZ_CP150165
Coordinates   3526100..3527053 (-) Length   317 a.a.
NCBI ID   WP_063386800.1    Uniprot ID   -
Organism   Aeribacillus sp. FSL W8-0870     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3521100..3532053
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU02_RS17120 (NSU02_17120) - 3521724..3522794 (+) 1071 WP_339193370.1 hypothetical protein -
  NSU02_RS17125 (NSU02_17125) - 3523288..3524244 (-) 957 WP_339193371.1 siderophore ABC transporter substrate-binding protein -
  NSU02_RS17130 (NSU02_17130) - 3524408..3525166 (-) 759 WP_339193372.1 ABC transporter ATP-binding protein -
  NSU02_RS17135 (NSU02_17135) - 3525160..3526110 (-) 951 WP_066249998.1 iron chelate uptake ABC transporter family permease subunit -
  NSU02_RS17140 (NSU02_17140) ceuB 3526100..3527053 (-) 954 WP_063386800.1 ABC transporter permease Machinery gene
  NSU02_RS17145 (NSU02_17145) - 3527437..3527913 (+) 477 WP_063386801.1 N-acetyltransferase -
  NSU02_RS17150 (NSU02_17150) - 3528134..3528988 (-) 855 WP_327873283.1 Cof-type HAD-IIB family hydrolase -
  NSU02_RS17155 (NSU02_17155) - 3529028..3530890 (-) 1863 WP_327873284.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34892.98 Da        Isoelectric Point: 9.8243

>NTDB_id=964485 NSU02_RS17140 WP_063386800.1 3526100..3527053(-) (ceuB) [Aeribacillus sp. FSL W8-0870]
MKKRYLIIALIILSIASIFIGVNDIKPTDIFNLTDEQIQILIISRIPRVISIIIAGTSISIAGLIMQQLSRNKFVSPTTA
GTMDSARLGILVAIMVFADASPIQKMIVAFAFALLGTFIFMKILEKIKYKDTIFVPLVGLMFGNIIGSITTFFAYKNNLI
QNVSSWLEGDFSLILKGQYELLYVSIPFVLIAYLYANQFTVAGMGEEFSKNLGLNYKQVVNIGLVIVALITSSVVLTVGT
IPFLGLVVPNIVAIYNGDHLKKNLIHTALLGAVFVMFCDILGRIIIYPYEISISLTVGVIGSAIFVYLLMRRKAYGL

Nucleotide


Download         Length: 954 bp        

>NTDB_id=964485 NSU02_RS17140 WP_063386800.1 3526100..3527053(-) (ceuB) [Aeribacillus sp. FSL W8-0870]
ATGAAAAAACGATATTTGATCATTGCTCTCATTATCCTTTCAATTGCATCGATTTTTATCGGAGTAAACGATATTAAACC
AACTGATATATTCAATTTGACAGATGAACAAATACAAATTTTAATCATCAGCAGAATTCCGCGCGTTATTAGCATTATTA
TTGCAGGAACGAGTATAAGCATTGCCGGTCTTATTATGCAGCAGCTGAGCAGAAACAAGTTCGTTTCCCCAACTACGGCA
GGAACAATGGATTCCGCCAGATTGGGGATTTTAGTTGCGATCATGGTTTTTGCAGACGCTAGTCCGATTCAAAAAATGAT
TGTCGCTTTTGCTTTTGCACTTTTAGGAACATTTATCTTTATGAAAATATTAGAAAAAATTAAATATAAAGATACTATTT
TTGTTCCTCTAGTCGGGCTGATGTTCGGCAACATCATTGGATCTATCACTACTTTTTTTGCATACAAAAATAATTTGATT
CAAAATGTTTCCTCATGGCTGGAAGGAGATTTTTCGTTAATTTTAAAAGGTCAATATGAATTATTGTACGTCAGCATTCC
TTTTGTATTAATTGCATACTTGTATGCGAATCAATTCACTGTCGCTGGAATGGGAGAGGAATTTTCGAAAAATTTAGGCT
TGAATTATAAACAAGTTGTCAATATCGGACTTGTTATCGTAGCTTTGATCACTTCATCTGTTGTATTGACGGTTGGAACC
ATTCCGTTTCTAGGTCTTGTCGTTCCGAATATTGTCGCCATATACAATGGAGACCATTTGAAAAAGAATTTGATTCATAC
CGCTTTGCTCGGTGCTGTTTTCGTTATGTTTTGCGATATTTTAGGGCGAATCATTATATATCCGTACGAAATCTCGATCA
GCTTAACCGTCGGTGTCATCGGCAGTGCCATTTTTGTTTACTTACTTATGAGGAGAAAAGCATATGGGTTATAG

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.313

98.738

0.536

Multiple sequence alignment