Detailed information NTG0964463

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ACJEH8_RS06360
• Genome accession: NZ_CP174244
• Coordinates: 1399676..1400701 (+)
• Length: 341 a.a.
• NCBI ID: WP_011213596.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain SPF580
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 1394676..1405701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJEH8_RS06330 (ACJEH8_06330)	-	1395106..1395423 (+)	318	WP_011215326.1	DUF2845 domain-containing protein	-
ACJEH8_RS06335 (ACJEH8_06335)	-	1395461..1395832 (+)	372	WP_070322067.1	protease inhibitor I42 family protein	-
ACJEH8_RS06340 (ACJEH8_06340)	-	1395889..1397604 (-)	1716	WP_070322066.1	NAD-dependent malic enzyme	-
ACJEH8_RS06345 (ACJEH8_06345)	-	1397684..1398067 (+)	384	WP_011215329.1	hypothetical protein	-
ACJEH8_RS06350 (ACJEH8_06350)	surE	1398070..1398828 (+)	759	WP_011215330.1	5'/3'-nucleotidase SurE	-
ACJEH8_RS06355 (ACJEH8_06355)	-	1398847..1399590 (+)	744	WP_011215331.1	peptidoglycan DD-metalloendopeptidase family protein	-
ACJEH8_RS06360 (ACJEH8_06360)	rpoS	1399676..1400701 (+)	1026	WP_011213596.1	RNA polymerase sigma factor RpoS	Regulator
ACJEH8_RS06365 (ACJEH8_06365)	hmgA	1400804..1402054 (-)	1251	WP_011215332.1	homogentisate 1,2-dioxygenase	-
ACJEH8_RS06370 (ACJEH8_06370)	-	1402201..1402944 (+)	744	WP_070322064.1	YebC/PmpR family DNA-binding transcriptional regulator	-
ACJEH8_RS06375 (ACJEH8_06375)	ruvC	1402944..1403468 (+)	525	WP_011215334.1	crossover junction endodeoxyribonuclease RuvC	-
ACJEH8_RS06380 (ACJEH8_06380)	ruvA	1403465..1404064 (+)	600	WP_011213600.1	Holliday junction branch migration protein RuvA	-
ACJEH8_RS06385 (ACJEH8_06385)	-	1404115..1404435 (+)	321	WP_070322063.1	hypothetical protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 39433.70 Da
• Isoelectric Point: 4.3732

>NTDB_id=964463 ACJEH8_RS06360 WP_011213596.1 1399676..1400701(+) (rpoS) [Legionella pneumophila strain SPF580]
MQDEEEPIKDKEFKEEEWSEPDDDSLLSEEDIEPDIEKMEEELDELPEFTDDEAFPSFQRGKNIAKALDATQLYLGEIGF
SPLLTAEEEIHYATLALKGDMEARKKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYAT
WWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAEMVDKPLEDVQKLLGLNDKVASVDTPIG
FDETKSLLDTIADENSLNPAELLTNENLRQHIESLLDKLTENQQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQV
EALKTLRTLLERVGLTQEDLF

Nucleotide

• Length: 1026 bp

>NTDB_id=964463 ACJEH8_RS06360 WP_011213596.1 1399676..1400701(+) (rpoS) [Legionella pneumophila strain SPF580]
ATGCAAGATGAAGAAGAGCCAATTAAGGACAAGGAATTTAAAGAAGAGGAATGGTCTGAGCCAGATGATGACTCTCTGTT
GTCAGAAGAGGATATTGAACCTGATATCGAAAAAATGGAAGAAGAGCTTGATGAACTTCCAGAGTTTACTGATGATGAAG
CTTTTCCTTCATTCCAGCGCGGGAAAAATATTGCCAAGGCTTTAGATGCGACTCAACTTTACTTGGGTGAAATTGGTTTT
TCTCCTTTGCTAACGGCTGAAGAAGAAATCCATTATGCGACTCTTGCTTTAAAAGGTGATATGGAAGCACGCAAGAAAAT
GATTGAGTCGAATTTGCGCCTGGTGGTTAAAATAGCCAGACGTTATCTTAATAGAGGCTTACCTCTTCTGGATCTAATCG
AAGAGGGTAACCTGGGTTTAATGAAGTCTGTTGAGAAATTTGACCCCAAGCGAGGATTCCGTTTTTCAACTTATGCGACC
TGGTGGATTAGGCAAACTATTGAGCGCGCAATTATGAATCAAACGAGAACTATCCGCCTGCCTATTCATGTCGTGAAAGA
ACTTAATGTATATCTCAGAGCGGCAAGACAATTGACGCAAAAACTGGATCATGAACCATCACCGGAAGAAATAGCGGAAA
TGGTGGATAAGCCTTTGGAGGATGTCCAAAAATTATTGGGTTTGAATGATAAAGTCGCCTCGGTTGATACTCCAATTGGA
TTTGATGAAACCAAATCTTTATTAGATACAATTGCTGATGAAAACAGTTTAAATCCTGCAGAGCTGCTAACCAACGAGAA
TTTAAGGCAGCATATAGAATCTCTTCTGGATAAATTAACTGAGAATCAACAGCAGGTTATCGCAAGACGTTTTGGGTTAA
GAGGTTTTGAAAAAGCGACACTGGAAGACGTTGGTAAAGAAATTGATTTGACCCGAGAACGCGTTCGCCAAATTCAAGTT
GAAGCTTTGAAGACACTTAGAACTTTGTTAGAGCGGGTTGGACTAACACAAGAGGATTTGTTTTGA

Domains

Predicted by InterProScan.

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (69-101)

• Sigma-70 region 3 (Sigma70_r3) (187-261)

• Sigma-70 region 2 (Sigma70_r2) (107-176)

• Sigma-70, region 4 (Sigma70_r4) (275-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	67.509	81.232	0.548