Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   NSU02_RS05965 Genome accession   NZ_CP150165
Coordinates   1228650..1230467 (+) Length   605 a.a.
NCBI ID   WP_339194733.1    Uniprot ID   -
Organism   Aeribacillus sp. FSL W8-0870     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 1223650..1235467
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU02_RS05945 (NSU02_05945) - 1223869..1224525 (-) 657 WP_144596613.1 TerC family protein -
  NSU02_RS05950 (NSU02_05950) mecA 1224794..1225456 (+) 663 WP_063387000.1 adaptor protein MecA -
  NSU02_RS05955 (NSU02_05955) cls 1225575..1227080 (+) 1506 WP_339194729.1 cardiolipin synthase -
  NSU02_RS05960 (NSU02_05960) - 1227372..1228565 (+) 1194 WP_339194731.1 competence protein CoiA family protein -
  NSU02_RS05965 (NSU02_05965) pepF 1228650..1230467 (+) 1818 WP_339194733.1 oligoendopeptidase F Regulator
  NSU02_RS05970 (NSU02_05970) - 1230638..1230811 (-) 174 WP_162536160.1 hypothetical protein -
  NSU02_RS05975 (NSU02_05975) - 1231182..1232042 (-) 861 WP_232515740.1 ClpXP adapter SpxH family protein -
  NSU02_RS05980 (NSU02_05980) - 1232056..1232466 (-) 411 WP_063387493.1 hypothetical protein -
  NSU02_RS05985 (NSU02_05985) - 1232764..1233366 (-) 603 WP_082829459.1 lytic transglycosylase domain-containing protein -
  NSU02_RS05990 (NSU02_05990) - 1233366..1233956 (-) 591 WP_339194736.1 CYTH domain-containing protein -
  NSU02_RS05995 (NSU02_05995) - 1234069..1234437 (+) 369 WP_066248334.1 hypothetical protein -
  NSU02_RS06000 (NSU02_06000) - 1234451..1235080 (+) 630 WP_066248332.1 GTP pyrophosphokinase family protein -

Sequence

Protein


Download         Length: 605 a.a.        Molecular weight: 70068.76 Da        Isoelectric Point: 4.8668

>NTDB_id=964462 NSU02_RS05965 WP_339194733.1 1228650..1230467(+) (pepF) [Aeribacillus sp. FSL W8-0870]
MGNETAVKRLPKREEIPVEYTWRLEDIFASDDEWEKEFEEVKQLIPKIGEYRGKLGQSSDLLYEALSYQDSVMERLGKLY
TYAHMRYDQDTTNSFYQGLNDRAANLYTQASSLSSYIVPEILSIEEEKLQQFLKENDQLKLYAHALDEINRQRPHVLDAE
QEAILAQAAEALSTASNTFGKLNNADLEFPAIKDENGEEVEITHGRYIQFLESENRRVRRDAFQALYATYGKFKNTFAST
LSGAVKKNNFYAKVRKYENARQAALSANNIPEEVYDNLVKTINEHLPLLHRYVDLRKKALKLDELHMYDLYTPLVQNVDM
KITYEEAKDIVLKGLAPLSEEYVGILQEGFENRWIDVKENKGKRSGAYSSGAYGTNPYILLNWQDNVNNLFTLVHELGHS
VHSYYTRKTQPYPYGDYSIFVAEVASTCNENLLNEYLLNTIDDEKKRLYLLNHFLEGFRGTVFRQTMFAEFEHYIHLKAQ
NGEPLTPEFLTQTYYELNKKYFGDNIVVDEEIGLEWARIPHFYYNFYVYQYATGFSAASALSKQILSEGETAVERYINFL
KAGSSDYPINVLKKAGVDMTSTKPIEDACKVFEEKLTEMEELLLK

Nucleotide


Download         Length: 1818 bp        

>NTDB_id=964462 NSU02_RS05965 WP_339194733.1 1228650..1230467(+) (pepF) [Aeribacillus sp. FSL W8-0870]
ATGGGCAATGAAACAGCTGTCAAAAGGCTGCCAAAACGGGAAGAAATCCCTGTTGAGTATACTTGGCGGCTAGAAGATAT
TTTTGCTTCTGATGATGAATGGGAAAAAGAATTTGAAGAAGTAAAGCAGCTAATTCCAAAAATCGGTGAATATAGAGGAA
AATTAGGTCAATCCTCCGATCTGTTATATGAGGCGCTCTCTTATCAAGATTCCGTGATGGAGAGGCTTGGAAAGCTTTAT
ACATATGCCCATATGCGCTACGATCAAGATACAACTAATTCTTTTTATCAAGGATTGAATGACAGGGCAGCAAATCTTTA
TACTCAAGCTTCCAGCCTCTCATCCTATATCGTTCCGGAAATACTATCCATTGAAGAAGAAAAGCTTCAGCAATTTTTGA
AAGAAAATGATCAATTGAAGCTTTATGCACATGCCTTGGACGAAATCAACCGGCAAAGACCTCACGTGCTCGATGCGGAG
CAAGAGGCTATTTTAGCTCAAGCTGCGGAAGCCCTGAGCACTGCCTCCAATACGTTTGGAAAATTAAATAATGCGGACTT
GGAATTTCCAGCAATTAAGGATGAAAATGGAGAAGAAGTGGAAATCACTCACGGCCGTTATATCCAGTTTTTGGAGAGTG
AAAATAGACGAGTCCGTCGCGATGCGTTCCAAGCATTATACGCAACATATGGAAAATTTAAAAATACGTTTGCCAGCACA
TTAAGCGGAGCTGTTAAGAAAAATAATTTTTATGCGAAGGTGCGGAAATATGAGAATGCCCGCCAGGCTGCACTAAGCGC
CAACAACATTCCCGAGGAAGTCTACGACAATTTAGTGAAAACGATCAATGAACATTTGCCGCTGCTCCATCGTTATGTCG
ATTTGCGGAAAAAAGCGCTGAAGCTTGATGAACTTCATATGTATGATCTTTATACGCCGCTTGTACAAAACGTCGATATG
AAAATCACGTATGAAGAAGCGAAAGACATCGTATTGAAGGGGCTTGCTCCATTAAGTGAAGAATATGTCGGCATTTTACA
AGAAGGCTTTGAAAACAGATGGATTGACGTTAAGGAGAATAAAGGGAAACGAAGCGGAGCTTACTCCTCTGGCGCCTATG
GAACAAATCCATATATTTTGCTGAATTGGCAAGATAATGTGAACAATTTATTCACACTTGTTCACGAGCTTGGCCATTCG
GTACACAGCTACTATACAAGAAAAACACAGCCGTATCCGTACGGAGATTATTCTATTTTTGTCGCGGAAGTGGCTTCTAC
ATGCAATGAAAACTTGTTAAATGAATATTTGCTCAACACGATCGATGATGAAAAGAAACGTTTATACTTGCTGAATCATT
TCCTTGAAGGGTTTAGAGGAACGGTATTCCGGCAAACGATGTTTGCTGAGTTTGAACATTATATCCATTTGAAGGCGCAA
AACGGAGAGCCGCTCACACCGGAATTTTTGACGCAAACGTATTATGAGTTAAACAAAAAATATTTTGGTGACAACATTGT
CGTCGATGAAGAAATTGGCTTAGAATGGGCAAGAATTCCGCATTTTTATTACAATTTTTACGTTTATCAATACGCAACAG
GCTTTAGTGCTGCAAGCGCCTTGAGCAAGCAGATTTTATCGGAAGGAGAAACTGCCGTTGAAAGGTACATTAATTTCTTG
AAAGCGGGAAGCTCTGATTATCCGATTAATGTGCTGAAAAAAGCAGGGGTCGATATGACATCAACCAAGCCGATTGAAGA
TGCATGCAAAGTATTTGAAGAAAAGCTGACGGAGATGGAGGAGCTGCTGTTAAAGTAA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(120-189)

Peptidase family M3 (Peptidase_M3)

(210-590)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

51.096

98.017

0.501

Multiple sequence alignment