Detailed information NTG0964441

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NSQ53_RS20370
• Genome accession: NZ_CP150164
• Coordinates: 3868227..3869372 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus sp. PS11(2022) isolate PS11
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3863227..3874372

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ53_RS20345 (NSQ53_20345)	-	3863243..3864523 (+)	1281	WP_003242974.1	pitrilysin family protein	-
NSQ53_RS20350 (NSQ53_20350)	albG	3864520..3865221 (+)	702	WP_003243391.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
NSQ53_RS20355 (NSQ53_20355)	-	3865227..3866603 (-)	1377	WP_003244415.1	YncE family protein	-
NSQ53_RS20360 (NSQ53_20360)	-	3866642..3867997 (-)	1356	WP_003227552.1	YncE family protein	-
NSQ53_RS20365 (NSQ53_20365)	-	3867994..3868224 (-)	231	WP_009968328.1	hypothetical protein	-
NSQ53_RS20370 (NSQ53_20370)	rapF	3868227..3869372 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
NSQ53_RS20375 (NSQ53_20375)	phrF	3869356..3869475 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
NSQ53_RS20380 (NSQ53_20380)	-	3869574..3870047 (+)	474	WP_003227547.1	YbaK/EbsC family protein	-
NSQ53_RS20385 (NSQ53_20385)	speB	3870079..3870951 (-)	873	WP_003227545.1	agmatinase	-
NSQ53_RS20390 (NSQ53_20390)	speE	3871012..3871842 (-)	831	WP_003227543.1	spermidine synthase	-
NSQ53_RS20395 (NSQ53_20395)	-	3872044..3874119 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=964441 NSQ53_RS20370 WP_003227549.1 3868227..3869372(+) (rapF) [Bacillus sp. PS11(2022) isolate PS11]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=964441 NSQ53_RS20370 WP_003227549.1 3868227..3869372(+) (rapF) [Bacillus sp. PS11(2022) isolate PS11]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572