Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSQ53_RS07730 Genome accession   NZ_CP150164
Coordinates   1474970..1475545 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. PS11(2022) isolate PS11     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1469970..1480545
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ53_RS07700 (NSQ53_07700) dapD 1470156..1470866 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSQ53_RS07705 (NSQ53_07705) - 1470936..1472060 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  NSQ53_RS07710 (NSQ53_07710) - 1472122..1472367 (+) 246 WP_003232382.1 YkuS family protein -
  NSQ53_RS07715 (NSQ53_07715) mscT 1472404..1473207 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  NSQ53_RS07720 (NSQ53_07720) ahpA 1473444..1473986 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NSQ53_RS07725 (NSQ53_07725) ykuV 1474058..1474504 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  NSQ53_RS07730 (NSQ53_07730) rok 1474970..1475545 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  NSQ53_RS07735 (NSQ53_07735) cse15 1475586..1476551 (-) 966 WP_003245018.1 spore protein Cse15 -
  NSQ53_RS07740 (NSQ53_07740) - 1476688..1477287 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  NSQ53_RS07745 (NSQ53_07745) - 1477338..1478357 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  NSQ53_RS07750 (NSQ53_07750) glp 1478375..1479667 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  NSQ53_RS07755 (NSQ53_07755) mobB 1479628..1480149 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=964396 NSQ53_RS07730 WP_003232378.1 1474970..1475545(+) (rok) [Bacillus sp. PS11(2022) isolate PS11]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=964396 NSQ53_RS07730 WP_003232378.1 1474970..1475545(+) (rok) [Bacillus sp. PS11(2022) isolate PS11]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment