Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NSQ81_RS06235 Genome accession   NZ_CP150163
Coordinates   1208926..1210077 (+) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus sp. PS65     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1203926..1215077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ81_RS06200 (NSQ81_06200) - 1204598..1205815 (+) 1218 WP_010886478.1 MFS transporter -
  NSQ81_RS06205 (NSQ81_06205) - 1205979..1206557 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  NSQ81_RS06210 (NSQ81_06210) spx 1206738..1207133 (+) 396 WP_003245483.1 transcriptional regulator Spx -
  NSQ81_RS06215 (NSQ81_06215) - 1207176..1207832 (-) 657 WP_003232944.1 TerC family protein -
  NSQ81_RS06220 (NSQ81_06220) - 1208002..1208142 (+) 141 WP_119122854.1 hypothetical protein -
  NSQ81_RS06225 (NSQ81_06225) mecA 1208109..1208765 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  NSQ81_RS06230 (NSQ81_06230) - 1208760..1208882 (-) 123 WP_003245684.1 hypothetical protein -
  NSQ81_RS06235 (NSQ81_06235) coiA 1208926..1210077 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  NSQ81_RS06240 (NSQ81_06240) pepF 1210307..1212136 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  NSQ81_RS06245 (NSQ81_06245) - 1212174..1212341 (-) 168 WP_003244944.1 hypothetical protein -
  NSQ81_RS06250 (NSQ81_06250) spxH 1212655..1213554 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  NSQ81_RS06255 (NSQ81_06255) - 1213551..1213949 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  NSQ81_RS06260 (NSQ81_06260) cwlQ 1214204..1214938 (-) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=964305 NSQ81_RS06235 WP_003245839.1 1208926..1210077(+) (coiA) [Bacillus sp. PS65]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=964305 NSQ81_RS06235 WP_003245839.1 1208926..1210077(+) (coiA) [Bacillus sp. PS65]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974


Multiple sequence alignment