Detailed information    

insolico Bioinformatically predicted

Overview


Name   recP/tkt   Type   Machinery gene
Locus tag   ACJEIC_RS00775 Genome accession   NZ_CP174240
Coordinates   180126..182132 (-) Length   668 a.a.
NCBI ID   WP_070322215.1    Uniprot ID   -
Organism   Legionella pneumophila strain SPF585     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 175126..187132
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJEIC_RS00760 (ACJEIC_00760) pyk 176443..177867 (-) 1425 WP_011214416.1 pyruvate kinase -
  ACJEIC_RS00765 (ACJEIC_00765) - 177851..179041 (-) 1191 WP_011214417.1 phosphoglycerate kinase -
  ACJEIC_RS00770 (ACJEIC_00770) gap 179052..180044 (-) 993 WP_011214418.1 type I glyceraldehyde-3-phosphate dehydrogenase -
  ACJEIC_RS00775 (ACJEIC_00775) recP/tkt 180126..182132 (-) 2007 WP_070322215.1 transketolase Machinery gene
  ACJEIC_RS00780 (ACJEIC_00780) - 182391..183728 (+) 1338 WP_011214420.1 hypothetical protein -
  ACJEIC_RS00785 (ACJEIC_00785) - 183825..185840 (+) 2016 WP_041173703.1 M3 family metallopeptidase -

Sequence


Protein


Download         Length: 668 a.a.        Molecular weight: 73354.77 Da        Isoelectric Point: 5.8396

>NTDB_id=964176 ACJEIC_RS00775 WP_070322215.1 180126..182132(-) (recP/tkt) [Legionella pneumophila strain SPF585]
MNSFTELANAVRMLSIDAVNQAQSGHPGMPLGMADIATVLWKKFLKFNPQNPHWFNRDRFVLSNGHGSMLLYSLLHLTGY
NLDIGELKNFRQLHSKTPGHPEHGHTPGVETTTGPLGQGLANSVGMALAERVLASTFNHDHFNLVDHYTYTFAGDGCLME
GISHEACSLAGTLGLGKLIVFYDDNGISIDGKVESWFTDDTTSRFKAYNWQVIGPIDGHDANQIEHAISEARENTTQPSL
IICKTVIGLGSSVAGSEKAHGSPLSAQDISNVREFFNWKHASFEIPDSIYKQWDHKEQGEKEEQLWLQLLHEYQQQYPSE
HDDFLRRANGDLPDDWQEISAGFLKQCLNNEKAIATRKASQQCIEFFAPILPEMFGGSADLTGSNNTDWSGSKAITAHNF
SGNYLYYGVREFAMAAIMNGLAVHGGFIPYGGTFLVFADYARNAIRLSALMKQRVIYVLTHDSIGLGEDGPTHQPVEHIA
MLRMTPGMTVWRPADLMETAVAWQQSLEHHNGPSALLLSRQNLPALAHGTDAADLIKKGGYIIADCEGKPDAILIATGSE
VQLAITAAEKAKARGLQVRVVSMPCAEQFLAQSDDYKNQILPGQVRTRIAIEAASSAYWHQFVGFDGAVIGLDCFGVSAP
ATDAFNYLGITVEKIINTLDTLTKQTMV

Nucleotide


Download         Length: 2007 bp        

>NTDB_id=964176 ACJEIC_RS00775 WP_070322215.1 180126..182132(-) (recP/tkt) [Legionella pneumophila strain SPF585]
ATGAACAGTTTTACAGAATTAGCTAATGCGGTACGCATGTTAAGCATCGATGCAGTAAACCAGGCTCAATCAGGCCACCC
TGGCATGCCCTTGGGTATGGCTGATATTGCCACCGTTTTATGGAAAAAATTTCTAAAATTCAACCCCCAAAACCCGCACT
GGTTTAACAGAGATCGTTTTGTATTATCTAATGGCCATGGTTCCATGCTTCTCTATTCTTTACTGCATTTGACCGGATAC
AATCTGGATATTGGCGAGCTTAAAAACTTCCGCCAATTGCATTCAAAAACACCAGGACATCCGGAACATGGACATACTCC
CGGTGTTGAAACCACAACAGGGCCGTTAGGTCAAGGTTTGGCTAATTCAGTCGGGATGGCCTTAGCAGAACGTGTGCTGG
CCAGTACCTTTAACCACGACCACTTTAACCTGGTTGATCACTATACTTATACTTTTGCCGGTGATGGTTGCCTGATGGAA
GGCATTTCTCATGAAGCTTGTTCTTTAGCTGGCACTCTTGGTTTGGGAAAGCTCATTGTATTTTATGACGACAATGGGAT
ATCTATTGATGGCAAGGTGGAATCCTGGTTTACGGACGATACCACGTCTCGCTTTAAAGCCTACAACTGGCAAGTCATAG
GGCCCATCGATGGCCATGATGCAAATCAAATTGAGCACGCCATATCAGAAGCGCGCGAGAACACCACCCAACCTTCATTA
ATTATCTGTAAAACCGTCATAGGGCTTGGCTCCTCTGTAGCGGGCAGCGAAAAGGCACATGGCTCTCCATTGAGTGCCCA
GGACATAAGTAATGTTCGCGAATTTTTTAATTGGAAACATGCTTCTTTCGAAATTCCAGATTCGATATACAAGCAATGGG
ATCATAAAGAGCAGGGAGAAAAAGAAGAACAACTATGGCTGCAACTACTGCATGAATACCAACAGCAATATCCATCGGAA
CACGATGACTTTTTACGCCGTGCCAATGGTGACCTGCCTGATGATTGGCAGGAAATATCGGCTGGATTCCTGAAACAATG
CCTGAATAATGAAAAAGCTATAGCAACGCGTAAAGCGTCGCAGCAATGCATAGAATTTTTCGCGCCAATATTACCTGAAA
TGTTTGGCGGCTCGGCTGATTTGACTGGTTCCAATAATACGGACTGGTCAGGCAGCAAAGCCATCACGGCTCACAATTTT
TCCGGAAACTACCTTTATTATGGGGTGAGGGAATTCGCCATGGCAGCCATCATGAATGGGCTTGCTGTGCATGGAGGATT
CATTCCCTACGGCGGAACGTTCCTTGTTTTCGCAGATTATGCAAGAAATGCCATCCGTTTAAGCGCTTTAATGAAACAAA
GAGTGATATACGTATTGACTCATGATTCTATCGGTTTAGGGGAAGATGGCCCGACACACCAACCTGTAGAACACATCGCT
ATGTTAAGAATGACTCCTGGCATGACGGTCTGGCGTCCTGCTGATTTAATGGAAACCGCTGTTGCATGGCAACAATCGTT
AGAACATCATAATGGTCCGTCTGCCTTGTTACTCTCAAGACAAAATCTGCCCGCTTTAGCCCATGGCACCGATGCGGCTG
ACTTGATTAAGAAAGGTGGATACATTATTGCAGATTGTGAAGGGAAACCTGATGCTATCCTGATAGCCACTGGTTCAGAA
GTTCAACTGGCTATAACCGCAGCAGAAAAGGCAAAAGCAAGAGGTCTCCAGGTCAGGGTGGTATCCATGCCCTGTGCTGA
GCAGTTCCTTGCCCAGAGTGATGATTACAAAAACCAGATATTACCTGGTCAGGTTCGCACACGTATTGCGATAGAAGCAG
CTAGCAGTGCCTATTGGCACCAATTTGTTGGCTTTGACGGCGCTGTCATTGGGCTGGATTGTTTTGGGGTATCAGCTCCT
GCTACAGATGCTTTTAATTACCTTGGAATTACAGTAGAAAAAATTATCAATACTCTAGATACATTAACCAAACAAACAAT
GGTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recP/tkt Streptococcus pneumoniae TIGR4

46.809

98.503

0.461


Multiple sequence alignment