Detailed information NTG0964129

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: NSS90_RS06065
• Genome accession: NZ_CP150161
• Coordinates: 1166072..1167025 (+)
• Length: 317 a.a.
• NCBI ID: WP_014476425.1
• Uniprot ID: A0A0K6M9I2
• Organism: Bacillus sp. PS93
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1161072..1172025

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSS90_RS06040 (NSS90_06040)	argF	1162905..1163864 (+)	960	WP_076457865.1	ornithine carbamoyltransferase	-
NSS90_RS06045 (NSS90_06045)	-	1163950..1164129 (+)	180	WP_003245356.1	YjzC family protein	-
NSS90_RS06050 (NSS90_06050)	-	1164175..1164360 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
NSS90_RS06055 (NSS90_06055)	-	1164609..1165343 (+)	735	WP_003245223.1	hypothetical protein	-
NSS90_RS06060 (NSS90_06060)	-	1165425..1165982 (+)	558	WP_029317608.1	hypothetical protein	-
NSS90_RS06065 (NSS90_06065)	med	1166072..1167025 (+)	954	WP_014476425.1	transcriptional regulator Med	Regulator
NSS90_RS06070 (NSS90_06070)	comZ	1167040..1167231 (+)	192	WP_326147461.1	ComG operon transcriptional repressor ComZ	Regulator
NSS90_RS06075 (NSS90_06075)	yjzB	1167261..1167500 (-)	240	WP_003232972.1	spore coat protein YjzB	-
NSS90_RS06080 (NSS90_06080)	fabH	1167665..1168603 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
NSS90_RS06085 (NSS90_06085)	fabF	1168626..1169867 (+)	1242	WP_024573256.1	beta-ketoacyl-ACP synthase II	-
NSS90_RS06090 (NSS90_06090)	-	1169943..1170728 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
NSS90_RS06095 (NSS90_06095)	appD	1170920..1171906 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.84 Da
• Isoelectric Point: 4.6031

>NTDB_id=964129 NSS90_RS06065 WP_014476425.1 1166072..1167025(+) (med) [Bacillus sp. PS93]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=964129 NSS90_RS06065 WP_014476425.1 1166072..1167025(+) (med) [Bacillus sp. PS93]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAGGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGCTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAGATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAATACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGACA
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

3D structure

• AlphaFold DB: A0A0K6M9I2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	99.685	100	0.997