Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | NSQ12_RS12680 | Genome accession | NZ_CP150160 |
| Coordinates | 2465991..2466287 (-) | Length | 98 a.a. |
| NCBI ID | WP_029726719.1 | Uniprot ID | - |
| Organism | Bacillus sp. PS95 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2460991..2471287
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ12_RS12635 (NSQ12_12635) | tasA | 2461399..2462184 (-) | 786 | WP_015714250.1 | biofilm matrix protein TasA | - |
| NSQ12_RS12640 (NSQ12_12640) | - | 2462248..2462820 (-) | 573 | WP_003230181.1 | signal peptidase I | - |
| NSQ12_RS12645 (NSQ12_12645) | tapA | 2462804..2463565 (-) | 762 | WP_003230180.1 | amyloid fiber anchoring/assembly protein TapA | - |
| NSQ12_RS12650 (NSQ12_12650) | - | 2463837..2464163 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| NSQ12_RS12655 (NSQ12_12655) | - | 2464205..2464384 (-) | 180 | WP_072175549.1 | YqzE family protein | - |
| NSQ12_RS12660 (NSQ12_12660) | comGG | 2464455..2464829 (-) | 375 | WP_167408283.1 | ComG operon protein ComGG | Machinery gene |
| NSQ12_RS12665 (NSQ12_12665) | comGF | 2464830..2465213 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| NSQ12_RS12670 (NSQ12_12670) | comGE | 2465239..2465586 (-) | 348 | WP_167408284.1 | ComG operon protein 5 | Machinery gene |
| NSQ12_RS12675 (NSQ12_12675) | comGD | 2465570..2466001 (-) | 432 | WP_029726720.1 | comG operon protein ComGD | Machinery gene |
| NSQ12_RS12680 (NSQ12_12680) | comGC | 2465991..2466287 (-) | 297 | WP_029726719.1 | comG operon protein ComGC | Machinery gene |
| NSQ12_RS12685 (NSQ12_12685) | comGB | 2466301..2467338 (-) | 1038 | WP_339174855.1 | comG operon protein ComGB | Machinery gene |
| NSQ12_RS12690 (NSQ12_12690) | comGA | 2467325..2468395 (-) | 1071 | WP_069322755.1 | competence protein ComGA | Machinery gene |
| NSQ12_RS12695 (NSQ12_12695) | - | 2468657..2468806 (-) | 150 | WP_250540178.1 | hypothetical protein | - |
| NSQ12_RS12700 (NSQ12_12700) | corA | 2468808..2469761 (-) | 954 | WP_339174859.1 | magnesium transporter CorA | - |
| NSQ12_RS12705 (NSQ12_12705) | - | 2469904..2471232 (+) | 1329 | WP_033884708.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10835.67 Da Isoelectric Point: 6.2112
>NTDB_id=964075 NSQ12_RS12680 WP_029726719.1 2465991..2466287(-) (comGC) [Bacillus sp. PS95]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKNDAV
CPNGKRIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKNDAV
CPNGKRIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=964075 NSQ12_RS12680 WP_029726719.1 2465991..2466287(-) (comGC) [Bacillus sp. PS95]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAACGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATCGTGCTCTTTATTATTTCGATTTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAACCAAACCATTCAAAAAAAGGGCTGTGAAGGCTTACAAAACATGGTTAAGGCACAAATGACTG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAACGATGCTGTC
TGTCCAAATGGTAAGCGCATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
98.98 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |