Detailed information NTG0964060

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ACJEHH_RS03250
• Genome accession: NZ_CP174238
• Coordinates: 730596..731621 (-)
• Length: 341 a.a.
• NCBI ID: WP_011213596.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain SPF587
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 725596..736621

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJEHH_RS03225 (ACJEHH_03225)	-	726862..727182 (-)	321	WP_070322063.1	hypothetical protein	-
ACJEHH_RS03230 (ACJEHH_03230)	ruvA	727233..727832 (-)	600	WP_011213600.1	Holliday junction branch migration protein RuvA	-
ACJEHH_RS03235 (ACJEHH_03235)	ruvC	727829..728353 (-)	525	WP_011215334.1	crossover junction endodeoxyribonuclease RuvC	-
ACJEHH_RS03240 (ACJEHH_03240)	-	728353..729096 (-)	744	WP_070322064.1	YebC/PmpR family DNA-binding transcriptional regulator	-
ACJEHH_RS03245 (ACJEHH_03245)	hmgA	729243..730493 (+)	1251	WP_011215332.1	homogentisate 1,2-dioxygenase	-
ACJEHH_RS03250 (ACJEHH_03250)	rpoS	730596..731621 (-)	1026	WP_011213596.1	RNA polymerase sigma factor RpoS	Regulator
ACJEHH_RS03255 (ACJEHH_03255)	-	731707..732450 (-)	744	WP_011215331.1	peptidoglycan DD-metalloendopeptidase family protein	-
ACJEHH_RS03260 (ACJEHH_03260)	surE	732469..733227 (-)	759	WP_011215330.1	5'/3'-nucleotidase SurE	-
ACJEHH_RS03265 (ACJEHH_03265)	-	733230..733613 (-)	384	WP_011215329.1	hypothetical protein	-
ACJEHH_RS03270 (ACJEHH_03270)	-	733693..735408 (+)	1716	WP_070322066.1	NAD-dependent malic enzyme	-
ACJEHH_RS03275 (ACJEHH_03275)	-	735465..735836 (-)	372	WP_070322067.1	protease inhibitor I42 family protein	-
ACJEHH_RS03280 (ACJEHH_03280)	-	735874..736191 (-)	318	WP_011215326.1	DUF2845 domain-containing protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 39433.70 Da
• Isoelectric Point: 4.3732

>NTDB_id=964060 ACJEHH_RS03250 WP_011213596.1 730596..731621(-) (rpoS) [Legionella pneumophila strain SPF587]
MQDEEEPIKDKEFKEEEWSEPDDDSLLSEEDIEPDIEKMEEELDELPEFTDDEAFPSFQRGKNIAKALDATQLYLGEIGF
SPLLTAEEEIHYATLALKGDMEARKKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYAT
WWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAEMVDKPLEDVQKLLGLNDKVASVDTPIG
FDETKSLLDTIADENSLNPAELLTNENLRQHIESLLDKLTENQQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQV
EALKTLRTLLERVGLTQEDLF

Nucleotide

• Length: 1026 bp

>NTDB_id=964060 ACJEHH_RS03250 WP_011213596.1 730596..731621(-) (rpoS) [Legionella pneumophila strain SPF587]
ATGCAAGATGAAGAAGAGCCAATTAAGGACAAGGAATTTAAAGAAGAGGAATGGTCTGAGCCAGATGATGACTCTCTGTT
GTCAGAAGAGGATATTGAACCTGATATCGAAAAAATGGAAGAAGAGCTTGATGAACTTCCAGAGTTTACTGATGATGAAG
CTTTTCCTTCATTCCAGCGCGGGAAAAATATTGCCAAGGCTTTAGATGCGACTCAACTTTACTTGGGTGAAATTGGTTTT
TCTCCTTTGCTAACGGCTGAAGAAGAAATCCATTATGCGACTCTTGCTTTAAAAGGTGATATGGAAGCACGCAAGAAAAT
GATTGAGTCGAATTTGCGCCTGGTGGTTAAAATAGCCAGACGTTATCTTAATAGAGGCTTACCTCTTCTGGATCTAATCG
AAGAGGGTAACCTGGGTTTAATGAAGTCTGTTGAGAAATTTGACCCCAAGCGAGGATTCCGTTTTTCAACTTATGCGACC
TGGTGGATTAGGCAAACTATTGAGCGCGCAATTATGAATCAAACGAGAACTATCCGCCTGCCTATTCATGTCGTGAAAGA
ACTTAATGTATATCTCAGAGCGGCAAGACAATTGACGCAAAAACTGGATCATGAACCATCACCGGAAGAAATAGCGGAAA
TGGTGGATAAGCCTTTGGAGGATGTCCAAAAATTATTGGGTTTGAATGATAAAGTCGCCTCGGTTGATACTCCAATTGGA
TTTGATGAAACCAAATCTTTATTAGATACAATTGCTGATGAAAACAGTTTAAATCCTGCAGAGCTGCTAACCAACGAGAA
TTTAAGGCAGCATATAGAATCTCTTCTGGATAAATTAACTGAGAATCAACAGCAGGTTATCGCAAGACGTTTTGGGTTAA
GAGGTTTTGAAAAAGCGACACTGGAAGACGTTGGTAAAGAAATTGATTTGACCCGAGAACGCGTTCGCCAAATTCAAGTT
GAAGCTTTGAAGACACTTAGAACTTTGTTAGAGCGGGTTGGACTAACACAAGAGGATTTGTTTTGA

Domains

Predicted by InterProScan.

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (69-101)

• Sigma-70 region 3 (Sigma70_r3) (187-261)

• Sigma-70 region 2 (Sigma70_r2) (107-176)

• Sigma-70, region 4 (Sigma70_r4) (275-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	67.509	81.232	0.548