Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NSQ12_RS06190 Genome accession   NZ_CP150160
Coordinates   1189328..1190479 (+) Length   383 a.a.
NCBI ID   WP_024573349.1    Uniprot ID   -
Organism   Bacillus sp. PS95     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1184328..1195479
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ12_RS06155 (NSQ12_06155) - 1184999..1186216 (+) 1218 WP_339176662.1 MFS transporter -
  NSQ12_RS06160 (NSQ12_06160) - 1186381..1186959 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  NSQ12_RS06165 (NSQ12_06165) spx 1187140..1187535 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  NSQ12_RS06170 (NSQ12_06170) - 1187578..1188234 (-) 657 WP_003232944.1 TerC family protein -
  NSQ12_RS06175 (NSQ12_06175) - 1188404..1188544 (+) 141 WP_119122854.1 hypothetical protein -
  NSQ12_RS06180 (NSQ12_06180) mecA 1188511..1189167 (+) 657 WP_015252354.1 adaptor protein MecA Regulator
  NSQ12_RS06185 (NSQ12_06185) - 1189162..1189284 (-) 123 WP_003245684.1 hypothetical protein -
  NSQ12_RS06190 (NSQ12_06190) coiA 1189328..1190479 (+) 1152 WP_024573349.1 competence protein CoiA Machinery gene
  NSQ12_RS06195 (NSQ12_06195) pepF 1190709..1192538 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  NSQ12_RS06200 (NSQ12_06200) - 1192576..1192743 (-) 168 WP_003244944.1 hypothetical protein -
  NSQ12_RS06205 (NSQ12_06205) spxH 1193057..1193956 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  NSQ12_RS06210 (NSQ12_06210) - 1193953..1194351 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  NSQ12_RS06215 (NSQ12_06215) cwlQ 1194606..1195340 (-) 735 WP_249678509.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44918.00 Da        Isoelectric Point: 9.8767

>NTDB_id=964054 NSQ12_RS06190 WP_024573349.1 1189328..1190479(+) (coiA) [Bacillus sp. PS95]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGADDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=964054 NSQ12_RS06190 WP_024573349.1 1189328..1190479(+) (coiA) [Bacillus sp. PS95]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATTAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAGCTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTATACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGACGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAGCGGCAGACACCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGCGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

97.389

0.961


Multiple sequence alignment