Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NSQ12_RS06070 Genome accession   NZ_CP150160
Coordinates   1167040..1167231 (+) Length   63 a.a.
NCBI ID   WP_326147461.1    Uniprot ID   -
Organism   Bacillus sp. PS95     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1162040..1172231
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ12_RS06040 (NSQ12_06040) argF 1162905..1163864 (+) 960 WP_076457865.1 ornithine carbamoyltransferase -
  NSQ12_RS06045 (NSQ12_06045) - 1163950..1164129 (+) 180 WP_003245356.1 YjzC family protein -
  NSQ12_RS06050 (NSQ12_06050) - 1164175..1164360 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  NSQ12_RS06055 (NSQ12_06055) - 1164609..1165343 (+) 735 WP_003245223.1 hypothetical protein -
  NSQ12_RS06060 (NSQ12_06060) - 1165425..1165982 (+) 558 WP_029317608.1 hypothetical protein -
  NSQ12_RS06065 (NSQ12_06065) med 1166072..1167025 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  NSQ12_RS06070 (NSQ12_06070) comZ 1167040..1167231 (+) 192 WP_326147461.1 ComG operon transcriptional repressor ComZ Regulator
  NSQ12_RS06075 (NSQ12_06075) yjzB 1167261..1167500 (-) 240 WP_003232972.1 spore coat protein YjzB -
  NSQ12_RS06080 (NSQ12_06080) fabH 1167665..1168603 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  NSQ12_RS06085 (NSQ12_06085) fabF 1168626..1169867 (+) 1242 WP_024573256.1 beta-ketoacyl-ACP synthase II -
  NSQ12_RS06090 (NSQ12_06090) - 1169943..1170728 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  NSQ12_RS06095 (NSQ12_06095) appD 1170920..1171906 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7244.30 Da        Isoelectric Point: 4.2564

>NTDB_id=964050 NSQ12_RS06070 WP_326147461.1 1167040..1167231(+) (comZ) [Bacillus sp. PS95]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMETIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=964050 NSQ12_RS06070 WP_326147461.1 1167040..1167231(+) (comZ) [Bacillus sp. PS95]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGACCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984

Multiple sequence alignment