Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NSQ12_RS04530 Genome accession   NZ_CP150160
Coordinates   880625..881419 (+) Length   264 a.a.
NCBI ID   WP_041332784.1    Uniprot ID   -
Organism   Bacillus sp. PS95     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 875625..886419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ12_RS04500 (NSQ12_04500) - 876465..877496 (+) 1032 WP_101501786.1 iron ABC transporter permease -
  NSQ12_RS04505 (NSQ12_04505) - 877610..878491 (+) 882 WP_339176044.1 PhzF family phenazine biosynthesis isomerase -
  NSQ12_RS04510 (NSQ12_04510) - 878579..879163 (+) 585 WP_003243940.1 nitroreductase -
  NSQ12_RS04515 (NSQ12_04515) - 879202..879393 (-) 192 WP_003233561.1 YfhD family protein -
  NSQ12_RS04520 (NSQ12_04520) - 879460..879570 (-) 111 WP_003223230.1 YfhE family protein -
  NSQ12_RS04525 (NSQ12_04525) - 879625..880536 (-) 912 WP_198878901.1 TIGR01777 family oxidoreductase -
  NSQ12_RS04530 (NSQ12_04530) recX 880625..881419 (+) 795 WP_041332784.1 recombination regulator RecX Regulator
  NSQ12_RS04535 (NSQ12_04535) - 881421..881735 (+) 315 WP_003233553.1 YfhH family protein -
  NSQ12_RS04540 (NSQ12_04540) - 881879..883072 (+) 1194 WP_217024776.1 MFS transporter -
  NSQ12_RS04545 (NSQ12_04545) - 883104..883256 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NSQ12_RS04550 (NSQ12_04550) - 883381..883650 (+) 270 WP_003243789.1 YfhJ family protein -
  NSQ12_RS04555 (NSQ12_04555) - 883795..884313 (+) 519 WP_015715537.1 SH3 domain-containing protein -
  NSQ12_RS04560 (NSQ12_04560) spdL 884398..884730 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  NSQ12_RS04565 (NSQ12_04565) ephM 884717..885577 (+) 861 WP_069703773.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31057.24 Da        Isoelectric Point: 6.6686

>NTDB_id=964041 NSQ12_RS04530 WP_041332784.1 880625..881419(+) (recX) [Bacillus sp. PS95]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELRQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=964041 NSQ12_RS04530 WP_041332784.1 880625..881419(+) (recX) [Bacillus sp. PS95]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAGACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992