Detailed information NTG0964037

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: NSQ12_RS02250
• Genome accession: NZ_CP150160
• Coordinates: 433310..434458 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus sp. PS95
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 428310..439458

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NSQ12_RS02230 (NSQ12_02230)	-	428686..429366 (-)	681	WP_128480737.1	ABC transporter ATP-binding protein	-
NSQ12_RS02235 (NSQ12_02235)	-	429382..430842 (-)	1461	WP_015382763.1	ABC transporter permease	-
NSQ12_RS02240 (NSQ12_02240)	yclJ	431055..431738 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
NSQ12_RS02245 (NSQ12_02245)	yclK	431725..433146 (+)	1422	WP_339175803.1	two-component system sensor histidine kinase YclK	-
NSQ12_RS02250 (NSQ12_02250)	rapC	433310..434458 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
NSQ12_RS02255 (NSQ12_02255)	phrC	434442..434564 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
NSQ12_RS02260 (NSQ12_02260)	-	434664..434753 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
NSQ12_RS02265 (NSQ12_02265)	-	434835..434948 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
NSQ12_RS02270 (NSQ12_02270)	-	435102..436466 (-)	1365	WP_003234493.1	aspartate kinase	-
NSQ12_RS02275 (NSQ12_02275)	ceuB	436851..437801 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
NSQ12_RS02280 (NSQ12_02280)	yclO	437794..438741 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=964037 NSQ12_RS02250 WP_003246686.1 433310..434458(+) (rapC) [Bacillus sp. PS95]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=964037 NSQ12_RS02250 WP_003246686.1 433310..434458(+) (rapC) [Bacillus sp. PS95]
ATGAAGAGTGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATAGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGAGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAATATGGCCC
AAGCGGAACAAAAAGCCCAGCTGGTCGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACGTTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAGTGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571