Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NST79_RS06295 Genome accession   NZ_CP150159
Coordinates   1206664..1207815 (+) Length   383 a.a.
NCBI ID   WP_212059660.1    Uniprot ID   -
Organism   Bacillus sp. PS196     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1201664..1212815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST79_RS06260 (NST79_06260) - 1202124..1203341 (+) 1218 WP_153255904.1 MFS transporter -
  NST79_RS06265 (NST79_06265) - 1203505..1204083 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  NST79_RS06270 (NST79_06270) spx 1204264..1204659 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  NST79_RS06275 (NST79_06275) - 1204914..1205570 (-) 657 WP_003232944.1 TerC family protein -
  NST79_RS06280 (NST79_06280) - 1205740..1205880 (+) 141 WP_119122854.1 hypothetical protein -
  NST79_RS06285 (NST79_06285) mecA 1205847..1206503 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  NST79_RS06290 (NST79_06290) - 1206498..1206620 (-) 123 WP_003245684.1 hypothetical protein -
  NST79_RS06295 (NST79_06295) coiA 1206664..1207815 (+) 1152 WP_212059660.1 competence protein CoiA Machinery gene
  NST79_RS06300 (NST79_06300) pepF 1208045..1209874 (+) 1830 WP_212059658.1 oligoendopeptidase F -
  NST79_RS06305 (NST79_06305) - 1209912..1210079 (-) 168 WP_003244944.1 hypothetical protein -
  NST79_RS06310 (NST79_06310) spxH 1210393..1211292 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  NST79_RS06315 (NST79_06315) - 1211289..1211687 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  NST79_RS06320 (NST79_06320) cwlQ 1211942..1212676 (-) 735 WP_041340378.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44948.07 Da        Isoelectric Point: 9.9417

>NTDB_id=963975 NST79_RS06295 WP_212059660.1 1206664..1207815(+) (coiA) [Bacillus sp. PS196]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTESFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGVGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGDKRAPIRFSAVLQQCKLHIHNK
NIALRFECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=963975 NST79_RS06295 WP_212059660.1 1206664..1207815(+) (coiA) [Bacillus sp. PS196]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGAGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACACAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGAGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATTCATCGGGCAGGTGTAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAAGGATTTCTTTATTTGTTTA
TGACGGATCTTGGAGATAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTTCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGTGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

98.66

97.389

0.961