Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NST79_RS04650 Genome accession   NZ_CP150159
Coordinates   901921..902715 (+) Length   264 a.a.
NCBI ID   WP_212059891.1    Uniprot ID   -
Organism   Bacillus sp. PS196     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 896921..907715
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST79_RS04620 (NST79_04620) - 897760..898791 (+) 1032 WP_003233568.1 iron ABC transporter permease -
  NST79_RS04625 (NST79_04625) - 898906..899787 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  NST79_RS04630 (NST79_04630) - 899875..900459 (+) 585 WP_046160214.1 nitroreductase -
  NST79_RS04635 (NST79_04635) - 900498..900689 (-) 192 WP_003233561.1 YfhD family protein -
  NST79_RS04640 (NST79_04640) - 900756..900866 (-) 111 WP_003223230.1 YfhE family protein -
  NST79_RS04645 (NST79_04645) - 900921..901832 (-) 912 WP_212059893.1 TIGR01777 family oxidoreductase -
  NST79_RS04650 (NST79_04650) recX 901921..902715 (+) 795 WP_212059891.1 recombination regulator RecX Regulator
  NST79_RS04655 (NST79_04655) - 902717..903031 (+) 315 WP_212059889.1 YfhH family protein -
  NST79_RS04660 (NST79_04660) - 903174..904367 (+) 1194 WP_003243500.1 MFS transporter -
  NST79_RS04665 (NST79_04665) - 904399..904551 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NST79_RS04670 (NST79_04670) - 904676..904945 (+) 270 WP_003243789.1 YfhJ family protein -
  NST79_RS04675 (NST79_04675) - 905090..905608 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  NST79_RS04680 (NST79_04680) spdL 905693..906025 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  NST79_RS04685 (NST79_04685) ephM 906012..906872 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31041.28 Da        Isoelectric Point: 6.6686

>NTDB_id=963962 NST79_RS04650 WP_212059891.1 901921..902715(+) (recX) [Bacillus sp. PS196]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESVMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=963962 NST79_RS04650 WP_212059891.1 901921..902715(+) (recX) [Bacillus sp. PS196]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGTCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996