Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NST79_RS02235 Genome accession   NZ_CP150159
Coordinates   431887..432837 (+) Length   316 a.a.
NCBI ID   WP_087960839.1    Uniprot ID   A0AAX3RML5
Organism   Bacillus sp. PS196     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 426887..437837
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST79_RS02210 (NST79_02210) rapC 428346..429494 (+) 1149 WP_003246686.1 response regulator aspartate phosphatase RapC Regulator
  NST79_RS02215 (NST79_02215) phrC 429478..429600 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  NST79_RS02220 (NST79_02220) - 429700..429789 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  NST79_RS02225 (NST79_02225) - 429871..429984 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  NST79_RS02230 (NST79_02230) - 430138..431502 (-) 1365 WP_212059765.1 aspartate kinase -
  NST79_RS02235 (NST79_02235) ceuB 431887..432837 (+) 951 WP_087960839.1 petrobactin ABC transporter permease YclN Machinery gene
  NST79_RS02240 (NST79_02240) yclO 432830..433777 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  NST79_RS02245 (NST79_02245) yclP 433771..434529 (+) 759 WP_212059767.1 ABC transporter ATP-binding protein -
  NST79_RS02250 (NST79_02250) yclQ 434551..435504 (+) 954 WP_212059769.1 siderophore ABC transporter substrate-binding protein -
  NST79_RS02255 (NST79_02255) - 435550..436968 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34889.31 Da        Isoelectric Point: 9.9364

>NTDB_id=963960 NST79_RS02235 WP_087960839.1 431887..432837(+) (ceuB) [Bacillus sp. PS196]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRMPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=963960 NST79_RS02235 WP_087960839.1 431887..432837(+) (ceuB) [Bacillus sp. PS196]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTATGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTACAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCCCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCGGTGTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525