Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | NSQ21_RS13095 | Genome accession | NZ_CP150158 |
| Coordinates | 2544524..2544934 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus sp. PS210 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2539890..2595242 | 2544524..2544934 | within | 0 |
Gene organization within MGE regions
Location: 2539890..2595242
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NSQ21_RS13070 (NSQ21_13070) | - | 2540057..2540788 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| NSQ21_RS13075 (NSQ21_13075) | cwlH | 2541040..2541792 (-) | 753 | WP_003229963.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| NSQ21_RS13080 (NSQ21_13080) | - | 2541979..2542605 (+) | 627 | WP_003229962.1 | TVP38/TMEM64 family protein | - |
| NSQ21_RS13085 (NSQ21_13085) | gnd | 2542624..2543517 (-) | 894 | WP_003229961.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| NSQ21_RS13090 (NSQ21_13090) | - | 2543769..2544491 (+) | 723 | WP_010886572.1 | hypothetical protein | - |
| NSQ21_RS13095 (NSQ21_13095) | nucA/comI | 2544524..2544934 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| NSQ21_RS13100 (NSQ21_13100) | - | 2545130..2545477 (+) | 348 | Protein_2531 | sigma-70 family RNA polymerase sigma factor | - |
| NSQ21_RS13105 (NSQ21_13105) | spoIVCA | 2545508..2546968 (-) | 1461 | WP_223257626.1 | site-specific DNA recombinase SpoIVCA | - |
| NSQ21_RS13110 (NSQ21_13110) | - | 2546926..2547104 (-) | 179 | Protein_2533 | hypothetical protein | - |
| NSQ21_RS13115 (NSQ21_13115) | - | 2547459..2547878 (-) | 420 | WP_004398596.1 | thioredoxin-dependent arsenate reductase | - |
| NSQ21_RS13120 (NSQ21_13120) | acr3 | 2547890..2548930 (-) | 1041 | WP_004398718.1 | arsenite efflux transporter Acr3 | - |
| NSQ21_RS13125 (NSQ21_13125) | - | 2548953..2549393 (-) | 441 | WP_003229954.1 | ArsI/CadI family heavy metal resistance metalloenzyme | - |
| NSQ21_RS13130 (NSQ21_13130) | arsR | 2549454..2549771 (-) | 318 | WP_004399122.1 | arsenical resistance operon transcriptional regulator ArsR | - |
| NSQ21_RS13135 (NSQ21_13135) | - | 2550143..2550907 (-) | 765 | WP_004398670.1 | YqcI/YcgG family protein | - |
| NSQ21_RS13140 (NSQ21_13140) | rapE | 2551350..2552477 (+) | 1128 | WP_004398842.1 | response regulator aspartate phosphatase RapE | - |
| NSQ21_RS13145 (NSQ21_13145) | phrE | 2552467..2552601 (+) | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| NSQ21_RS13150 (NSQ21_13150) | - | 2552711..2552870 (+) | 160 | Protein_2541 | hypothetical protein | - |
| NSQ21_RS13155 (NSQ21_13155) | yqcG | 2553240..2554835 (+) | 1596 | WP_015714309.1 | LXG family T7SS effector endonuclease toxin YqcG | - |
| NSQ21_RS13160 (NSQ21_13160) | yqcF | 2554850..2555428 (+) | 579 | WP_015714310.1 | type VII secretion system immunity protein YqcF | - |
| NSQ21_RS13165 (NSQ21_13165) | - | 2555546..2555692 (+) | 147 | WP_009967791.1 | hypothetical protein | - |
| NSQ21_RS13170 (NSQ21_13170) | - | 2555689..2556051 (-) | 363 | WP_003229947.1 | hypothetical protein | - |
| NSQ21_RS13175 (NSQ21_13175) | - | 2556067..2556546 (-) | 480 | WP_004399085.1 | hypothetical protein | - |
| NSQ21_RS13180 (NSQ21_13180) | cwlA | 2556711..2557529 (-) | 819 | WP_003229946.1 | N-acetylmuramoyl-L-alanine amidase CwlA | - |
| NSQ21_RS13185 (NSQ21_13185) | - | 2557574..2557996 (-) | 423 | WP_003246208.1 | holin family protein | - |
| NSQ21_RS13190 (NSQ21_13190) | - | 2558041..2558934 (-) | 894 | WP_003246010.1 | hypothetical protein | - |
| NSQ21_RS13195 (NSQ21_13195) | - | 2559022..2559186 (-) | 165 | WP_003229944.1 | XkdX family protein | - |
| NSQ21_RS13200 (NSQ21_13200) | - | 2559183..2559518 (-) | 336 | WP_009967793.1 | XkdW family protein | - |
| NSQ21_RS13205 (NSQ21_13205) | - | 2559528..2560628 (-) | 1101 | WP_003229943.1 | pyocin knob domain-containing protein | - |
| NSQ21_RS13210 (NSQ21_13210) | - | 2560631..2560903 (-) | 273 | WP_003229942.1 | hypothetical protein | - |
| NSQ21_RS13215 (NSQ21_13215) | - | 2560900..2561478 (-) | 579 | WP_003229941.1 | YmfQ family protein | - |
| NSQ21_RS13220 (NSQ21_13220) | - | 2561462..2562508 (-) | 1047 | WP_003229940.1 | baseplate J/gp47 family protein | - |
| NSQ21_RS13225 (NSQ21_13225) | - | 2562501..2562926 (-) | 426 | WP_004398572.1 | DUF2634 domain-containing protein | - |
| NSQ21_RS13230 (NSQ21_13230) | - | 2562939..2563202 (-) | 264 | WP_003229938.1 | DUF2577 family protein | - |
| NSQ21_RS13235 (NSQ21_13235) | - | 2563199..2564179 (-) | 981 | WP_004398524.1 | hypothetical protein | - |
| NSQ21_RS13240 (NSQ21_13240) | - | 2564192..2564851 (-) | 660 | WP_004398548.1 | LysM peptidoglycan-binding domain-containing protein | - |
| NSQ21_RS13245 (NSQ21_13245) | - | 2564844..2569601 (-) | 4758 | WP_003246092.1 | phage tail tape measure protein | - |
| NSQ21_RS13250 (NSQ21_13250) | - | 2569604..2569741 (-) | 138 | WP_003229934.1 | hypothetical protein | - |
| NSQ21_RS13255 (NSQ21_13255) | - | 2569783..2570232 (-) | 450 | WP_003229933.1 | phage portal protein | - |
| NSQ21_RS13260 (NSQ21_13260) | txpA | 2570378..2570557 (+) | 180 | WP_004398662.1 | type I toxin-antitoxin system toxin TxpA | - |
| NSQ21_RS13265 (NSQ21_13265) | bsrH | 2570937..2571026 (+) | 90 | WP_075058862.1 | type I toxin-antitoxin system toxin BsrH | - |
| NSQ21_RS13270 (NSQ21_13270) | - | 2571280..2571723 (-) | 444 | WP_003229930.1 | phage tail tube protein | - |
| NSQ21_RS13275 (NSQ21_13275) | - | 2571726..2573126 (-) | 1401 | WP_003229929.1 | phage tail sheath family protein | - |
| NSQ21_RS13280 (NSQ21_13280) | - | 2573127..2573318 (-) | 192 | WP_010886574.1 | hypothetical protein | - |
| NSQ21_RS13285 (NSQ21_13285) | - | 2573315..2573752 (-) | 438 | WP_003229927.1 | DUF6838 family protein | - |
| NSQ21_RS13290 (NSQ21_13290) | - | 2573765..2574268 (-) | 504 | WP_003246050.1 | HK97 gp10 family phage protein | - |
| NSQ21_RS13295 (NSQ21_13295) | - | 2574265..2574627 (-) | 363 | WP_003229925.1 | YqbH/XkdH family protein | - |
| NSQ21_RS13300 (NSQ21_13300) | - | 2574624..2575019 (-) | 396 | WP_004398566.1 | DUF3199 family protein | - |
| NSQ21_RS13305 (NSQ21_13305) | - | 2575023..2575334 (-) | 312 | WP_003229923.1 | YqbF domain-containing protein | - |
| NSQ21_RS13310 (NSQ21_13310) | - | 2575345..2576280 (-) | 936 | WP_003229922.1 | phage major capsid protein | - |
| NSQ21_RS13315 (NSQ21_13315) | - | 2576299..2577267 (-) | 969 | WP_003229921.1 | XkdF-like putative serine protease domain-containing protein | - |
| NSQ21_RS13320 (NSQ21_13320) | - | 2577300..2577953 (-) | 654 | WP_003229920.1 | hypothetical protein | - |
| NSQ21_RS13325 (NSQ21_13325) | - | 2577994..2578911 (-) | 918 | WP_004398748.1 | phage head morphogenesis protein | - |
| NSQ21_RS13330 (NSQ21_13330) | - | 2578908..2580440 (-) | 1533 | WP_004398894.1 | phage portal protein | - |
| NSQ21_RS13335 (NSQ21_13335) | - | 2580444..2581739 (-) | 1296 | WP_003229917.1 | PBSX family phage terminase large subunit | - |
| NSQ21_RS13340 (NSQ21_13340) | terS | 2581732..2582451 (-) | 720 | WP_003229916.1 | phage terminase small subunit | - |
| NSQ21_RS13345 (NSQ21_13345) | - | 2582519..2582983 (-) | 465 | WP_004398685.1 | hypothetical protein | - |
| NSQ21_RS13350 (NSQ21_13350) | - | 2583127..2583537 (-) | 411 | WP_213377383.1 | sigma-70 family RNA polymerase sigma factor | - |
| NSQ21_RS13355 (NSQ21_13355) | - | 2583780..2584709 (+) | 930 | WP_003229913.1 | hypothetical protein | - |
| NSQ21_RS13360 (NSQ21_13360) | - | 2584783..2584989 (-) | 207 | WP_003229912.1 | XtrA/YqaO family protein | - |
| NSQ21_RS13365 (NSQ21_13365) | - | 2585071..2585499 (-) | 429 | WP_009967809.1 | RusA family crossover junction endodeoxyribonuclease | - |
| NSQ21_RS13370 (NSQ21_13370) | - | 2585595..2585744 (-) | 150 | WP_003229910.1 | hypothetical protein | - |
| NSQ21_RS13375 (NSQ21_13375) | - | 2585735..2586676 (-) | 942 | WP_075058863.1 | ATP-binding protein | - |
| NSQ21_RS13380 (NSQ21_13380) | - | 2586558..2587235 (-) | 678 | WP_116362964.1 | DnaD domain protein | - |
| NSQ21_RS13385 (NSQ21_13385) | - | 2587311..2588165 (-) | 855 | WP_003229907.1 | recombinase RecT | - |
| NSQ21_RS13390 (NSQ21_13390) | - | 2588168..2589127 (-) | 960 | WP_004398673.1 | YqaJ viral recombinase family protein | - |
| NSQ21_RS13395 (NSQ21_13395) | - | 2589233..2589427 (-) | 195 | WP_003229905.1 | hypothetical protein | - |
| NSQ21_RS13400 (NSQ21_13400) | - | 2589387..2589560 (-) | 174 | WP_119123069.1 | hypothetical protein | - |
| NSQ21_RS13405 (NSQ21_13405) | - | 2589557..2589814 (-) | 258 | WP_003245994.1 | YqaH family protein | - |
| NSQ21_RS13410 (NSQ21_13410) | - | 2589811..2590380 (-) | 570 | WP_004398626.1 | helix-turn-helix transcriptional regulator | - |
| NSQ21_RS13415 (NSQ21_13415) | - | 2590454..2590594 (-) | 141 | WP_003229902.1 | hypothetical protein | - |
| NSQ21_RS13420 (NSQ21_13420) | - | 2590624..2590854 (-) | 231 | WP_004398958.1 | helix-turn-helix transcriptional regulator | - |
| NSQ21_RS13425 (NSQ21_13425) | sknR | 2591031..2591381 (+) | 351 | WP_004398704.1 | transcriptional regulator SknR | - |
| NSQ21_RS13430 (NSQ21_13430) | - | 2591648..2591815 (-) | 168 | WP_003229900.1 | hypothetical protein | - |
| NSQ21_RS13435 (NSQ21_13435) | - | 2592171..2592707 (-) | 537 | WP_004399117.1 | AAA family ATPase | - |
| NSQ21_RS13440 (NSQ21_13440) | - | 2592976..2593494 (+) | 519 | WP_004399097.1 | ImmA/IrrE family metallo-endopeptidase | - |
| NSQ21_RS13445 (NSQ21_13445) | - | 2593500..2593892 (+) | 393 | Protein_2600 | sigma-70 family RNA polymerase sigma factor | - |
| NSQ21_RS13450 (NSQ21_13450) | - | 2593892..2594008 (+) | 117 | WP_003229898.1 | hypothetical protein | - |
| NSQ21_RS13455 (NSQ21_13455) | - | 2593974..2594174 (-) | 201 | Protein_2602 | recombinase family protein | - |
| NSQ21_RS13460 (NSQ21_13460) | - | 2594117..2594281 (-) | 165 | WP_010886576.1 | hypothetical protein | - |
| NSQ21_RS13465 (NSQ21_13465) | psiE | 2594826..2595242 (-) | 417 | WP_003246154.1 | phosphate-starvation-inducible protein PsiE | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=963923 NSQ21_RS13095 WP_009967785.1 2544524..2544934(-) (nucA/comI) [Bacillus sp. PS210]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=963923 NSQ21_RS13095 WP_009967785.1 2544524..2544934(-) (nucA/comI) [Bacillus sp. PS210]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGGGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGTGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGTACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |