Detailed information NTG0963897

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: ACJEH2_RS13690
• Genome accession: NZ_CP174235
• Coordinates: 3067672..3068697 (+)
• Length: 341 a.a.
• NCBI ID: WP_011213596.1
• Uniprot ID: -
• Organism: Legionella pneumophila strain SPF590
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 3062672..3073697

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJEH2_RS13660 (ACJEH2_13660)	-	3063102..3063419 (+)	318	WP_011215326.1	DUF2845 domain-containing protein	-
ACJEH2_RS13665 (ACJEH2_13665)	-	3063457..3063828 (+)	372	WP_070322067.1	protease inhibitor I42 family protein	-
ACJEH2_RS13670 (ACJEH2_13670)	-	3063885..3065600 (-)	1716	WP_070322066.1	NAD-dependent malic enzyme	-
ACJEH2_RS13675 (ACJEH2_13675)	-	3065680..3066063 (+)	384	WP_011215329.1	hypothetical protein	-
ACJEH2_RS13680 (ACJEH2_13680)	surE	3066066..3066824 (+)	759	WP_011215330.1	5'/3'-nucleotidase SurE	-
ACJEH2_RS13685 (ACJEH2_13685)	-	3066843..3067586 (+)	744	WP_011215331.1	peptidoglycan DD-metalloendopeptidase family protein	-
ACJEH2_RS13690 (ACJEH2_13690)	rpoS	3067672..3068697 (+)	1026	WP_011213596.1	RNA polymerase sigma factor RpoS	Regulator
ACJEH2_RS13695 (ACJEH2_13695)	hmgA	3068800..3070050 (-)	1251	WP_011215332.1	homogentisate 1,2-dioxygenase	-
ACJEH2_RS13700 (ACJEH2_13700)	-	3070197..3070940 (+)	744	WP_070322064.1	YebC/PmpR family DNA-binding transcriptional regulator	-
ACJEH2_RS13705 (ACJEH2_13705)	ruvC	3070940..3071464 (+)	525	WP_011215334.1	crossover junction endodeoxyribonuclease RuvC	-
ACJEH2_RS13710 (ACJEH2_13710)	ruvA	3071461..3072060 (+)	600	WP_011213600.1	Holliday junction branch migration protein RuvA	-
ACJEH2_RS13715 (ACJEH2_13715)	-	3072111..3072431 (+)	321	WP_070322063.1	hypothetical protein	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 39433.70 Da
• Isoelectric Point: 4.3732

>NTDB_id=963897 ACJEH2_RS13690 WP_011213596.1 3067672..3068697(+) (rpoS) [Legionella pneumophila strain SPF590]
MQDEEEPIKDKEFKEEEWSEPDDDSLLSEEDIEPDIEKMEEELDELPEFTDDEAFPSFQRGKNIAKALDATQLYLGEIGF
SPLLTAEEEIHYATLALKGDMEARKKMIESNLRLVVKIARRYLNRGLPLLDLIEEGNLGLMKSVEKFDPKRGFRFSTYAT
WWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARQLTQKLDHEPSPEEIAEMVDKPLEDVQKLLGLNDKVASVDTPIG
FDETKSLLDTIADENSLNPAELLTNENLRQHIESLLDKLTENQQQVIARRFGLRGFEKATLEDVGKEIDLTRERVRQIQV
EALKTLRTLLERVGLTQEDLF

Nucleotide

• Length: 1026 bp

>NTDB_id=963897 ACJEH2_RS13690 WP_011213596.1 3067672..3068697(+) (rpoS) [Legionella pneumophila strain SPF590]
ATGCAAGATGAAGAAGAGCCAATTAAGGACAAGGAATTTAAAGAAGAGGAATGGTCTGAGCCAGATGATGACTCTCTGTT
GTCAGAAGAGGATATTGAACCTGATATCGAAAAAATGGAAGAAGAGCTTGATGAACTTCCAGAGTTTACTGATGATGAAG
CTTTTCCTTCATTCCAGCGCGGGAAAAATATTGCCAAGGCTTTAGATGCGACTCAACTTTACTTGGGTGAAATTGGTTTT
TCTCCTTTGCTAACGGCTGAAGAAGAAATCCATTATGCGACTCTTGCTTTAAAAGGTGATATGGAAGCACGCAAGAAAAT
GATTGAGTCGAATTTGCGCCTGGTGGTTAAAATAGCCAGACGTTATCTTAATAGAGGCTTACCTCTTCTGGATCTAATCG
AAGAGGGTAACCTGGGTTTAATGAAGTCTGTTGAGAAATTTGACCCCAAGCGAGGATTCCGTTTTTCAACTTATGCGACC
TGGTGGATTAGGCAAACTATTGAGCGCGCAATTATGAATCAAACGAGAACTATCCGCCTGCCTATTCATGTCGTGAAAGA
ACTTAATGTATATCTCAGAGCGGCAAGACAATTGACGCAAAAACTGGATCATGAACCATCACCGGAAGAAATAGCGGAAA
TGGTGGATAAGCCTTTGGAGGATGTCCAAAAATTATTGGGTTTGAATGATAAAGTCGCCTCGGTTGATACTCCAATTGGA
TTTGATGAAACCAAATCTTTATTAGATACAATTGCTGATGAAAACAGTTTAAATCCTGCAGAGCTGCTAACCAACGAGAA
TTTAAGGCAGCATATAGAATCTCTTCTGGATAAATTAACTGAGAATCAACAGCAGGTTATCGCAAGACGTTTTGGGTTAA
GAGGTTTTGAAAAAGCGACACTGGAAGACGTTGGTAAAGAAATTGATTTGACCCGAGAACGCGTTCGCCAAATTCAAGTT
GAAGCTTTGAAGACACTTAGAACTTTGTTAGAGCGGGTTGGACTAACACAAGAGGATTTGTTTTGA

Domains

Predicted by InterProScan.

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (69-101)

• Sigma-70 region 3 (Sigma70_r3) (187-261)

• Sigma-70 region 2 (Sigma70_r2) (107-176)

• Sigma-70, region 4 (Sigma70_r4) (275-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	67.509	81.232	0.548