Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NSQ21_RS06245 Genome accession   NZ_CP150158
Coordinates   1212144..1213295 (+) Length   383 a.a.
NCBI ID   WP_003245839.1    Uniprot ID   A0AAE2VB70
Organism   Bacillus sp. PS210     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1207144..1218295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ21_RS06210 (NSQ21_06210) - 1207816..1209033 (+) 1218 WP_010886478.1 MFS transporter -
  NSQ21_RS06215 (NSQ21_06215) - 1209197..1209775 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  NSQ21_RS06220 (NSQ21_06220) spx 1209956..1210351 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  NSQ21_RS06225 (NSQ21_06225) - 1210394..1211050 (-) 657 WP_003232944.1 TerC family protein -
  NSQ21_RS06230 (NSQ21_06230) - 1211220..1211360 (+) 141 WP_119122854.1 hypothetical protein -
  NSQ21_RS06235 (NSQ21_06235) mecA 1211327..1211983 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  NSQ21_RS06240 (NSQ21_06240) - 1211978..1212100 (-) 123 WP_003245684.1 hypothetical protein -
  NSQ21_RS06245 (NSQ21_06245) coiA 1212144..1213295 (+) 1152 WP_003245839.1 competence protein CoiA Machinery gene
  NSQ21_RS06250 (NSQ21_06250) pepF 1213525..1215354 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  NSQ21_RS06255 (NSQ21_06255) - 1215392..1215559 (-) 168 WP_003244944.1 hypothetical protein -
  NSQ21_RS06260 (NSQ21_06260) spxH 1215873..1216772 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  NSQ21_RS06265 (NSQ21_06265) - 1216769..1217167 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  NSQ21_RS06270 (NSQ21_06270) cwlQ 1217422..1218156 (-) 735 WP_041340378.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44755.85 Da        Isoelectric Point: 10.0034

>NTDB_id=963896 NSQ21_RS06245 WP_003245839.1 1212144..1213295(+) (coiA) [Bacillus sp. PS210]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=963896 NSQ21_RS06245 WP_003245839.1 1212144..1213295(+) (coiA) [Bacillus sp. PS210]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCGCCATAGACATCGAGCCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGCGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTACACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

97.389

0.974