Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSQ83_RS07920 Genome accession   NZ_CP150157
Coordinates   1499078..1499653 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus sp. PS217     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1494078..1504653
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ83_RS07890 (NSQ83_07890) dapD 1494268..1494978 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSQ83_RS07895 (NSQ83_07895) - 1495048..1496172 (+) 1125 WP_048655217.1 N-acetyldiaminopimelate deacetylase -
  NSQ83_RS07900 (NSQ83_07900) - 1496234..1496479 (+) 246 WP_003232382.1 YkuS family protein -
  NSQ83_RS07905 (NSQ83_07905) mscT 1496516..1497319 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  NSQ83_RS07910 (NSQ83_07910) ahpA 1497554..1498096 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NSQ83_RS07915 (NSQ83_07915) ykuV 1498166..1498612 (+) 447 Protein_1498 thiol-disulfide oxidoreductase YkuV -
  NSQ83_RS07920 (NSQ83_07920) rok 1499078..1499653 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  NSQ83_RS07925 (NSQ83_07925) cse15 1499694..1500659 (-) 966 WP_029727015.1 spore protein Cse15 -
  NSQ83_RS07930 (NSQ83_07930) - 1500796..1501395 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  NSQ83_RS07935 (NSQ83_07935) - 1501446..1502465 (+) 1020 WP_198878750.1 molybdopterin-synthase adenylyltransferase MoeB -
  NSQ83_RS07940 (NSQ83_07940) glp 1502483..1503775 (+) 1293 WP_198878751.1 gephyrin-like molybdotransferase Glp -
  NSQ83_RS07945 (NSQ83_07945) mobB 1503736..1504257 (+) 522 WP_088325787.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=963818 NSQ83_RS07920 WP_003232378.1 1499078..1499653(+) (rok) [Bacillus sp. PS217]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=963818 NSQ83_RS07920 WP_003232378.1 1499078..1499653(+) (rok) [Bacillus sp. PS217]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1