Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC   Type   Machinery gene
Locus tag   NST22_RS14615 Genome accession   NZ_CP150156
Coordinates   2791146..2791892 (-) Length   248 a.a.
NCBI ID   WP_010886586.1    Uniprot ID   A0AAE2SM29
Organism   Bacillus sp. PS237     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2786146..2796892
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST22_RS14585 (NST22_14585) - 2786474..2786908 (+) 435 WP_103330184.1 helix-turn-helix transcriptional regulator -
  NST22_RS14590 (NST22_14590) - 2786922..2787368 (+) 447 WP_195727760.1 ImmA/IrrE family metallo-endopeptidase -
  NST22_RS14595 (NST22_14595) - 2787417..2788835 (+) 1419 WP_195727934.1 recombinase family protein -
  NST22_RS14600 (NST22_14600) radC 2788854..2789255 (-) 402 Protein_2830 DNA repair protein RadC -
  NST22_RS14605 (NST22_14605) - 2789292..2789861 (-) 570 WP_004398496.1 Maf family nucleotide pyrophosphatase -
  NST22_RS14610 (NST22_14610) spoIIB 2790014..2791012 (-) 999 WP_004398782.1 stage II sporulation protein SpoIIB -
  NST22_RS14615 (NST22_14615) comC 2791146..2791892 (-) 747 WP_010886586.1 A24 family peptidase Machinery gene
  NST22_RS14620 (NST22_14620) - 2792032..2793324 (-) 1293 WP_003229640.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  NST22_RS14625 (NST22_14625) valS 2793384..2796026 (-) 2643 WP_004398606.1 valine--tRNA ligase -
  NST22_RS14630 (NST22_14630) - 2796474..2796665 (+) 192 WP_003222590.1 hypothetical protein -

Sequence

Protein


Download         Length: 248 a.a.        Molecular weight: 26435.04 Da        Isoelectric Point: 9.7944

>NTDB_id=963763 NST22_RS14615 WP_010886586.1 2791146..2791892(-) (comC) [Bacillus sp. PS237]
MLSILFIFGLILGSFYYTAGCRIPLHLSIIAPRSSCPFCRRTLTPAELIPILSFLFQKGKCKSCGHRISFMYPAAELVTA
CLFAAAGIRFGISLELFPAVVFISLLIIVAVTDIHFMLIPNRILIFFLPFLAAARLISPLDSWYAGLLGAAAGFLFLAVI
AAITHGGVGGGDIKLFAVIGFVLGVKMLAAAFFFSVLIGALYGAAAVLTGRLAKRQPLPFAPAIAAGSILAYLYGDSIIS
FYIKMALG

Nucleotide


Download         Length: 747 bp        

>NTDB_id=963763 NST22_RS14615 WP_010886586.1 2791146..2791892(-) (comC) [Bacillus sp. PS237]
ATGCTATCCATTCTTTTTATCTTCGGGCTTATCCTTGGTTCTTTTTACTATACGGCCGGGTGCCGTATCCCCTTACATCT
ATCTATTATTGCGCCCCGTTCATCATGCCCGTTTTGCCGGCGAACATTAACTCCTGCAGAATTAATTCCCATCCTGTCAT
TCCTATTTCAAAAAGGTAAATGTAAAAGCTGCGGGCATAGGATTTCTTTTATGTATCCCGCAGCAGAGCTTGTGACAGCG
TGTTTATTTGCCGCCGCAGGAATACGCTTTGGCATATCGCTGGAACTGTTTCCCGCTGTGGTGTTTATCTCTCTTCTCAT
TATTGTTGCAGTGACAGATATTCATTTTATGCTGATTCCAAATCGAATATTGATTTTCTTTCTTCCCTTTTTGGCGGCCG
CGAGATTGATTTCTCCGCTTGATTCCTGGTATGCAGGCCTGTTAGGTGCGGCAGCCGGATTTTTGTTTCTGGCTGTAATT
GCCGCAATCACCCATGGGGGAGTAGGGGGAGGAGATATTAAATTATTTGCGGTGATTGGCTTTGTGCTTGGTGTGAAAAT
GCTGGCAGCTGCCTTTTTCTTTTCAGTTTTGATAGGTGCATTATATGGAGCGGCAGCTGTTCTGACTGGTAGACTCGCTA
AAAGGCAGCCGCTTCCCTTCGCCCCCGCTATAGCCGCAGGGAGCATTTTAGCCTATTTATACGGTGACTCTATCATTTCT
TTTTATATCAAAATGGCATTGGGCTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(7-90)

Type IV leader peptidase family (Peptidase_A24)

(101-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC Bacillus subtilis subsp. subtilis str. 168

100

100

1