Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NSQ16_RS07700 Genome accession   NZ_CP150155
Coordinates   1465811..1466395 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus sp. PS108     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1460811..1471395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ16_RS07670 (NSQ16_07670) dapD 1460997..1461707 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NSQ16_RS07675 (NSQ16_07675) - 1461777..1462901 (+) 1125 WP_327836688.1 N-acetyldiaminopimelate deacetylase -
  NSQ16_RS07680 (NSQ16_07680) - 1462963..1463208 (+) 246 WP_003232382.1 YkuS family protein -
  NSQ16_RS07685 (NSQ16_07685) mscT 1463245..1464048 (-) 804 WP_327836690.1 small-conductance mechanosensitive channel protein MscT -
  NSQ16_RS07690 (NSQ16_07690) ahpA 1464285..1464827 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NSQ16_RS07695 (NSQ16_07695) ykuV 1464899..1465345 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  NSQ16_RS07700 (NSQ16_07700) rok 1465811..1466395 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  NSQ16_RS07705 (NSQ16_07705) cse15 1466436..1467401 (-) 966 WP_076457764.1 spore protein Cse15 -
  NSQ16_RS07710 (NSQ16_07710) - 1467538..1468137 (+) 600 WP_339232663.1 molybdenum cofactor guanylyltransferase -
  NSQ16_RS07715 (NSQ16_07715) - 1468188..1469207 (+) 1020 WP_283934325.1 molybdopterin-synthase adenylyltransferase MoeB -
  NSQ16_RS07720 (NSQ16_07720) glp 1469225..1470517 (+) 1293 WP_339232667.1 gephyrin-like molybdotransferase Glp -
  NSQ16_RS07725 (NSQ16_07725) mobB 1470478..1470999 (+) 522 WP_042974935.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=963653 NSQ16_RS07700 WP_014113628.1 1465811..1466395(+) (rok) [Bacillus sp. PS108]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=963653 NSQ16_RS07700 WP_014113628.1 1465811..1466395(+) (rok) [Bacillus sp. PS108]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974