Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | OO986_RS03040 | Genome accession | NZ_AP026552 |
| Coordinates | 629839..630357 (+) | Length | 172 a.a. |
| NCBI ID | WP_011079537.1 | Uniprot ID | Q7MHS7 |
| Organism | Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 624839..635357
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO986_RS03030 (VV208B2_05300) | gshA | 627580..629145 (+) | 1566 | WP_013571136.1 | glutamate--cysteine ligase | - |
| OO986_RS03035 (VV208B2_05310) | - | 629183..629788 (+) | 606 | WP_225480327.1 | hypothetical protein | - |
| OO986_RS03040 (VV208B2_05320) | luxS | 629839..630357 (+) | 519 | WP_011079537.1 | S-ribosylhomocysteine lyase | Regulator |
| OO986_RS03045 (VV208B2_05330) | - | 630447..631724 (-) | 1278 | WP_011079538.1 | HlyC/CorC family transporter | - |
| OO986_RS03050 (VV208B2_05340) | - | 631811..632605 (-) | 795 | WP_011079539.1 | inner membrane protein YpjD | - |
| OO986_RS03055 (VV208B2_05350) | ffh | 632819..634195 (+) | 1377 | WP_011079540.1 | signal recognition particle protein | - |
| OO986_RS03060 (VV208B2_05360) | rpsP | 634498..634746 (+) | 249 | WP_011079541.1 | 30S ribosomal protein S16 | - |
| OO986_RS03065 (VV208B2_05370) | rimM | 634762..635310 (+) | 549 | WP_011079542.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18899.69 Da Isoelectric Point: 5.2384
>NTDB_id=96364 OO986_RS03040 WP_011079537.1 629839..630357(+) (luxS) [Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp]
MPLLDSFTVDHTRMHAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRKHLNGASVEIIDISP
MGCRTGFYMSLIGAPSEQDVASAWTASMEDVLKVESQNKIPELNEYQCGTAAMHSLDEAKQIAQNILAAGISVNKNDELA
LPEAMLKELKVD
MPLLDSFTVDHTRMHAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRKHLNGASVEIIDISP
MGCRTGFYMSLIGAPSEQDVASAWTASMEDVLKVESQNKIPELNEYQCGTAAMHSLDEAKQIAQNILAAGISVNKNDELA
LPEAMLKELKVD
Nucleotide
Download Length: 519 bp
>NTDB_id=96364 OO986_RS03040 WP_011079537.1 629839..630357(+) (luxS) [Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp]
ATGCCATTATTAGATAGTTTTACCGTTGACCACACTCGCATGCATGCACCCGCGGTGCGTGTGGCAAAAACCATGCAGAC
GCCAAAAGGCGACACCATTACCGTGTTTGACTTACGTTTCACTGCACCTAACAAAGATATTTTGTCAGAGAAAGGCATTC
ACACTTTGGAGCACCTGTACGCAGGCTTTATGCGTAAGCATCTTAATGGCGCATCGGTTGAGATCATCGATATCTCACCG
ATGGGTTGTCGTACCGGTTTCTACATGAGCTTAATTGGTGCGCCGAGTGAGCAAGACGTGGCATCTGCGTGGACGGCTTC
GATGGAAGATGTGTTGAAAGTGGAAAGCCAAAACAAGATCCCTGAGTTGAACGAGTATCAGTGCGGTACCGCAGCCATGC
ACTCGCTAGATGAAGCGAAGCAAATCGCACAAAACATTCTGGCAGCAGGAATTTCGGTGAATAAAAATGATGAACTGGCA
TTGCCAGAAGCGATGTTGAAAGAGCTCAAAGTGGATTAA
ATGCCATTATTAGATAGTTTTACCGTTGACCACACTCGCATGCATGCACCCGCGGTGCGTGTGGCAAAAACCATGCAGAC
GCCAAAAGGCGACACCATTACCGTGTTTGACTTACGTTTCACTGCACCTAACAAAGATATTTTGTCAGAGAAAGGCATTC
ACACTTTGGAGCACCTGTACGCAGGCTTTATGCGTAAGCATCTTAATGGCGCATCGGTTGAGATCATCGATATCTCACCG
ATGGGTTGTCGTACCGGTTTCTACATGAGCTTAATTGGTGCGCCGAGTGAGCAAGACGTGGCATCTGCGTGGACGGCTTC
GATGGAAGATGTGTTGAAAGTGGAAAGCCAAAACAAGATCCCTGAGTTGAACGAGTATCAGTGCGGTACCGCAGCCATGC
ACTCGCTAGATGAAGCGAAGCAAATCGCACAAAACATTCTGGCAGCAGGAATTTCGGTGAATAAAAATGATGAACTGGCA
TTGCCAGAAGCGATGTTGAAAGAGCTCAAAGTGGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
87.135 |
99.419 |
0.866 |