Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NSQ16_RS04465 Genome accession   NZ_CP150155
Coordinates   881486..882280 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus sp. PS108     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 876486..887280
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ16_RS04435 (NSQ16_04435) - 877325..878356 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  NSQ16_RS04440 (NSQ16_04440) - 878471..879352 (+) 882 WP_144530880.1 PhzF family phenazine biosynthesis isomerase -
  NSQ16_RS04445 (NSQ16_04445) - 879440..880024 (+) 585 WP_003243940.1 nitroreductase -
  NSQ16_RS04450 (NSQ16_04450) - 880063..880254 (-) 192 WP_003233561.1 YfhD family protein -
  NSQ16_RS04455 (NSQ16_04455) - 880321..880431 (-) 111 WP_003223230.1 YfhE family protein -
  NSQ16_RS04460 (NSQ16_04460) - 880486..881397 (-) 912 WP_021481167.1 TIGR01777 family oxidoreductase -
  NSQ16_RS04465 (NSQ16_04465) recX 881486..882280 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  NSQ16_RS04470 (NSQ16_04470) - 882282..882596 (+) 315 WP_003244592.1 YfhH family protein -
  NSQ16_RS04475 (NSQ16_04475) - 882739..883932 (+) 1194 WP_021481165.1 MFS transporter -
  NSQ16_RS04480 (NSQ16_04480) - 883964..884116 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NSQ16_RS04485 (NSQ16_04485) - 884241..884510 (+) 270 WP_003243789.1 YfhJ family protein -
  NSQ16_RS04490 (NSQ16_04490) - 884655..885173 (+) 519 WP_085187167.1 SH3 domain-containing protein -
  NSQ16_RS04495 (NSQ16_04495) spdL 885258..885575 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  NSQ16_RS04500 (NSQ16_04500) ephM 885577..886437 (+) 861 WP_085187170.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=963635 NSQ16_RS04465 WP_029726844.1 881486..882280(+) (recX) [Bacillus sp. PS108]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=963635 NSQ16_RS04465 WP_029726844.1 881486..882280(+) (recX) [Bacillus sp. PS108]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996