Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NSU15_RS26085 Genome accession   NZ_CP150154
Coordinates   5810469..5812226 (+) Length   585 a.a.
NCBI ID   WP_339288087.1    Uniprot ID   -
Organism   Paenibacillus sp. FSL E2-0201     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5805469..5817226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSU15_RS26055 (NSU15_26055) - 5805548..5806123 (+) 576 WP_339288082.1 methyltransferase domain-containing protein -
  NSU15_RS26060 (NSU15_26060) - 5806143..5806822 (+) 680 Protein_5132 response regulator transcription factor -
  NSU15_RS26065 (NSU15_26065) - 5806815..5807909 (+) 1095 WP_042130978.1 HAMP domain-containing sensor histidine kinase -
  NSU15_RS26070 (NSU15_26070) - 5808071..5808742 (+) 672 WP_076120943.1 response regulator transcription factor -
  NSU15_RS26075 (NSU15_26075) - 5808739..5809818 (+) 1080 WP_339288083.1 HAMP domain-containing sensor histidine kinase -
  NSU15_RS26080 (NSU15_26080) - 5809815..5810300 (+) 486 WP_339288085.1 GNAT family N-acetyltransferase -
  NSU15_RS26085 (NSU15_26085) rcrP 5810469..5812226 (+) 1758 WP_339288087.1 ABC transporter ATP-binding protein Regulator
  NSU15_RS26090 (NSU15_26090) rcrQ 5812226..5813986 (+) 1761 WP_339288089.1 ABC transporter ATP-binding protein Regulator
  NSU15_RS26095 (NSU15_26095) - 5814633..5815451 (-) 819 WP_339288091.1 RNA methyltransferase -
  NSU15_RS26100 (NSU15_26100) - 5815854..5816537 (-) 684 WP_331281342.1 TrkA family potassium uptake protein -
  NSU15_RS26105 (NSU15_26105) - 5816701..5816937 (+) 237 WP_042130985.1 small acid-soluble spore protein SspI -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64433.92 Da        Isoelectric Point: 5.4116

>NTDB_id=963613 NSU15_RS26085 WP_339288087.1 5810469..5812226(+) (rcrP) [Paenibacillus sp. FSL E2-0201]
MLKLLKNLEPKEWFLFGISLMFIIAQVWLDLELPDYMSDITRLIQTPGSEMNEILVAGGWMLLCALGSLATSVVVAGIAA
RIAADLSARLRSNLFDKVQSFSMEEISNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWALLKISGKSWQWTLS
TGVAVALLVIIVAICIVLVLPKFKKLQLLTDNLNRVSRENLNGLRVIRAYNAEQYQEKKFAVANNELTSTNLFANNVMTM
LMPSITLIMSGLSLSIYWIGAVLIQAAEGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILLPRAQVSAKRINEVLETV
PSLKNGSVTQFPVKREDEIEFRGVSFKYPDAEEYVLENISFTAKQGETIAFIGSTGCGKSTLVNLIPRFYDATEGEVLVN
GINVKEYDQQALRNKMGYVSQKAVLFGGTVSSNIAFGENGSGQVLSSDIVDAVYTSQSSEFVEKLEGNYDAHIAQGGSNL
SGGQKQRLSIARAIARHPEILIFDDSFSALDYKTDRKLRSELKKDAHDSTMLIVAQRIGTIKDADKIIVLEAGQIAGIGT
HDQLMQTCSVYQEIAYSQLTKEELA

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=963613 NSU15_RS26085 WP_339288087.1 5810469..5812226(+) (rcrP) [Paenibacillus sp. FSL E2-0201]
ATGTTGAAATTACTCAAGAATCTGGAACCCAAAGAATGGTTCTTATTCGGTATCAGCCTTATGTTCATTATCGCTCAAGT
TTGGCTGGATTTAGAACTGCCTGACTACATGAGTGATATTACCCGGCTGATCCAGACACCAGGAAGCGAAATGAATGAGA
TCCTTGTGGCAGGAGGCTGGATGCTGCTCTGTGCTCTTGGCAGTCTGGCGACCTCGGTGGTTGTAGCAGGCATTGCTGCG
AGAATAGCGGCCGACTTGTCTGCAAGATTGCGTTCCAATTTGTTCGATAAGGTGCAGTCCTTCTCCATGGAGGAAATCAG
CAACTTCTCAACAGCAAGTCTAATTACCCGTTCCACGAATGACATCACGCAAGTACAAATGCTGATTGTGATCGGCTTAC
AACTGCTTGTGAAAGCTCCAATCCTTGCAGTGTGGGCGTTACTCAAGATTTCCGGCAAAAGCTGGCAGTGGACCCTTTCT
ACAGGTGTCGCGGTCGCACTGCTCGTAATTATTGTCGCGATCTGTATCGTGCTTGTCCTGCCTAAATTTAAAAAGCTGCA
GCTGCTTACAGATAATCTGAATCGTGTATCCAGAGAGAATCTTAACGGTCTTCGTGTCATCCGGGCTTACAATGCCGAGC
AATATCAGGAAAAGAAGTTCGCTGTAGCCAACAACGAGCTTACCAGTACCAATCTATTTGCCAACAATGTTATGACCATG
TTGATGCCAAGTATTACTTTGATTATGAGTGGGTTAAGCCTCTCCATCTATTGGATCGGTGCCGTACTCATTCAAGCAGC
CGAGGGGACAGCCAAGATGGGCTTGTTCTCAGATATGATCGTATTCTCTTCCTACGCTATGCAAGTAGTTATGGCCTTTA
TGATGCTGATTATGATCTTTATCTTACTGCCCCGCGCTCAAGTATCGGCTAAGCGTATCAATGAAGTGCTAGAAACAGTA
CCTAGCTTGAAGAATGGATCAGTAACTCAATTCCCTGTGAAGCGAGAAGATGAAATTGAATTCAGGGGGGTTAGCTTCAA
ATATCCAGATGCAGAGGAATATGTGTTGGAGAACATCAGCTTCACGGCGAAACAGGGAGAAACGATTGCTTTTATCGGAT
CAACAGGCTGCGGAAAAAGTACACTTGTTAATCTCATTCCCCGTTTCTATGATGCTACAGAAGGTGAAGTGCTGGTAAAT
GGCATCAATGTTAAAGAATACGACCAGCAAGCGCTACGGAATAAAATGGGCTACGTCTCCCAGAAGGCTGTTTTGTTTGG
AGGAACAGTGTCCTCCAATATTGCATTTGGTGAGAACGGCTCCGGTCAGGTCCTCAGTTCAGATATTGTAGATGCGGTGT
ACACTTCCCAATCCTCTGAATTTGTAGAAAAGCTAGAGGGGAACTATGATGCCCATATCGCCCAAGGCGGATCAAATCTC
TCTGGCGGGCAGAAACAACGGCTGTCAATTGCCAGGGCGATTGCACGACATCCAGAAATATTAATCTTTGACGATTCTTT
CTCGGCGCTTGACTATAAGACTGACCGCAAATTACGCAGTGAGCTAAAAAAAGACGCGCATGACTCAACAATGCTGATCG
TAGCTCAGCGTATCGGTACAATCAAAGACGCCGATAAAATCATTGTTCTGGAAGCCGGACAAATCGCCGGTATCGGAACT
CATGACCAATTAATGCAAACCTGCAGCGTATATCAGGAAATTGCCTACTCACAGCTGACCAAGGAGGAGCTTGCCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-506)

ABC transporter transmembrane region (ABC_membrane)

(18-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

51.846

100

0.528