Detailed information NTG0096350

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: OO986_RS01610
• Genome accession: NZ_AP026552
• Coordinates: 332364..333371 (-)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 327364..338371

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OO986_RS01580 (VV208B2_02850)	zapB	327490..327732 (-)	243	WP_011079328.1	cell division protein ZapB	-
OO986_RS01585 (VV208B2_02860)	rraA	327954..328475 (-)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
OO986_RS01590 (VV208B2_02870)	-	328551..329468 (-)	918	WP_011079330.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
OO986_RS01595 (VV208B2_02880)	hslU	329634..330965 (-)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
OO986_RS01600 (VV208B2_02890)	hslV	330993..331547 (-)	555	WP_011079332.1	ATP-dependent protease subunit HslV	-
OO986_RS01605 (VV208B2_02900)	-	331697..332254 (-)	558	WP_011151294.1	SPOR domain-containing protein	-
OO986_RS01610 (VV208B2_02910)	cytR	332364..333371 (-)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
OO986_RS01615 (VV208B2_02920)	priA	333600..335804 (-)	2205	WP_108694712.1	primosomal protein N'	-
OO986_RS01620 (VV208B2_02930)	rpmE	336085..336306 (+)	222	WP_011079336.1	50S ribosomal protein L31	-
OO986_RS01625 (VV208B2_02940)	-	336585..337862 (+)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
OO986_RS01630 (VV208B2_02950)	metJ	337949..338266 (-)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=96350 OO986_RS01610 WP_011079334.1 332364..333371(-) (cytR) [Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=96350 OO986_RS01610 WP_011079334.1 332364..333371(-) (cytR) [Vibrio vulnificus strain VV20-8B-2 isolate homogenised shrimp]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCAGTGTTGGAAGCTGGTTATTCCCCAAACTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTGTTGCTCGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCAATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTACGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCGCAAGATCT
GTCGATTGTCGGCTTCGATGACATTCAGTTCGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGGCATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCAGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875