Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   NSQ90_RS25725 Genome accession   NZ_CP150149
Coordinates   5790601..5792358 (+) Length   585 a.a.
NCBI ID   WP_042191741.1    Uniprot ID   A0A089IRA5
Organism   Paenibacillus sp. FSL H7-0737     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 5785601..5797358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NSQ90_RS25700 (NSQ90_25700) ascB 5785616..5787028 (-) 1413 WP_042191730.1 6-phospho-beta-glucosidase -
  NSQ90_RS25705 (NSQ90_25705) - 5787142..5788125 (+) 984 WP_042191732.1 LacI family DNA-binding transcriptional regulator -
  NSQ90_RS25710 (NSQ90_25710) - 5788204..5788875 (+) 672 WP_042191734.1 response regulator transcription factor -
  NSQ90_RS25715 (NSQ90_25715) - 5788872..5789951 (+) 1080 WP_042191736.1 HAMP domain-containing sensor histidine kinase -
  NSQ90_RS25720 (NSQ90_25720) - 5789948..5790433 (+) 486 WP_042191738.1 GNAT family N-acetyltransferase -
  NSQ90_RS25725 (NSQ90_25725) rcrP 5790601..5792358 (+) 1758 WP_042191741.1 ABC transporter ATP-binding protein Regulator
  NSQ90_RS25730 (NSQ90_25730) rcrQ 5792358..5794118 (+) 1761 WP_042191743.1 ABC transporter ATP-binding protein Regulator
  NSQ90_RS25735 (NSQ90_25735) - 5794192..5794980 (-) 789 WP_042194519.1 RNA methyltransferase -
  NSQ90_RS25740 (NSQ90_25740) - 5795239..5795898 (-) 660 WP_042191745.1 TrkA family potassium uptake protein -
  NSQ90_RS25745 (NSQ90_25745) - 5796035..5796271 (+) 237 WP_042191747.1 small acid-soluble spore protein SspI -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 64530.03 Da        Isoelectric Point: 5.1766

>NTDB_id=963436 NSQ90_RS25725 WP_042191741.1 5790601..5792358(+) (rcrP) [Paenibacillus sp. FSL H7-0737]
MLKLLKNLEPKEWFLFCISLMFIIAQVWLDLELPDYMSDITRLIQTPGSEMNEILVAGGWMLLCALGSLATSVVVAGIAA
RIAADLSARLRSKLFDKVQSFSMEEISNFSTASLITRSTNDITQVQMLIVIGLQLLVKAPILAVWAILKISGKSWEWTLT
TGAAVALLVVIVAVCIVLVLPKFKKLQLLTDNLNRVSRENLNGLRVIRAYNAEEYQEQKFAVANNELTSTNLFANNVMTL
LMPSITLIMSGLSLSIYWVGAVLIQAAEGTAKMGLFSDMIVFSSYAMQVVMAFMMLIMIFILLPRAQVSAKRINEVLETV
PSLKNGSVTQFPVKREDEIEFRGVSFKYPDAEEYVLENISFTAKQGETVAFIGSTGCGKSTLVNLIPRFYDATEGEVLVN
GINVREYDQKALRNKMGYVSQKAVLFGGTVSSNIAFGENGSGQVLSSDIVDAVYTSQSSEFVEKLEGNYDAHIAQGGTNL
SGGQKQRLSIARAIARRPEILIFDDSFSALDYKTDRKLRSELKKDAHDSTMLIVAQRIGTIKDADKIIVLEAGRIAGMGT
HDELMQSCDVYQEIAYSQLTKEELA

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=963436 NSQ90_RS25725 WP_042191741.1 5790601..5792358(+) (rcrP) [Paenibacillus sp. FSL H7-0737]
ATGTTGAAATTACTCAAGAATCTGGAACCCAAAGAATGGTTCTTATTCTGTATCAGTCTCATGTTCATTATCGCTCAAGT
CTGGCTGGATTTAGAACTGCCTGACTACATGAGTGATATTACCCGGCTGATCCAGACACCAGGGAGCGAAATGAATGAAA
TCCTTGTCGCAGGCGGTTGGATGCTGCTCTGTGCTCTTGGCAGTCTGGCGACCTCGGTTGTTGTAGCGGGCATTGCTGCA
AGAATAGCAGCCGATTTGTCTGCAAGATTGCGTTCCAAATTGTTCGATAAGGTACAATCCTTTTCGATGGAGGAGATCAG
TAACTTCTCAACAGCCAGTCTAATTACCCGTTCCACGAATGACATCACGCAAGTACAAATGCTGATTGTGATCGGCTTAC
AGCTACTTGTGAAAGCACCCATCCTCGCAGTGTGGGCGATACTCAAGATTTCGGGTAAAAGCTGGGAGTGGACTCTTACG
ACAGGTGCCGCGGTGGCATTGCTAGTGGTTATTGTCGCAGTCTGTATCGTGCTCGTCCTGCCTAAATTTAAAAAGCTGCA
GCTGCTTACAGATAATCTGAATCGTGTATCCAGAGAGAATCTTAACGGTCTTCGTGTCATCCGGGCATATAATGCCGAGG
AATATCAAGAACAGAAGTTCGCTGTAGCTAACAACGAGCTTACCAGCACCAACCTATTTGCCAACAATGTAATGACCCTA
TTGATGCCGAGTATTACTTTGATTATGAGTGGACTCAGTCTCTCCATCTATTGGGTGGGTGCAGTGCTCATTCAAGCAGC
CGAGGGTACTGCCAAGATGGGCTTGTTCTCAGATATGATCGTATTCTCATCTTATGCCATGCAAGTGGTTATGGCCTTTA
TGATGCTGATTATGATCTTTATTCTACTGCCCCGTGCTCAAGTATCGGCTAAGCGTATCAATGAAGTGCTAGAAACAGTA
CCTAGCTTGAAGAATGGATCAGTAACTCAATTCCCTGTGAAGCGAGAAGATGAAATTGAATTCAGGGGGGTTAGCTTCAA
ATATCCAGATGCAGAGGAATATGTGTTGGAGAACATCAGCTTCACGGCGAAGCAGGGGGAGACGGTTGCTTTTATCGGAT
CTACAGGCTGCGGGAAAAGTACACTTGTTAACCTCATTCCCCGTTTCTATGATGCTACAGAAGGCGAAGTGCTGGTAAAT
GGTATCAATGTCAGAGAATACGACCAGAAAGCGCTGCGGAATAAAATGGGCTATGTCTCTCAGAAGGCTGTTCTATTTGG
TGGAACAGTGTCCTCCAATATTGCATTTGGTGAGAACGGATCCGGTCAGGTCCTCAGTTCAGATATTGTAGATGCGGTGT
ACACTTCCCAATCCTCTGAATTTGTAGAAAAGCTAGAGGGGAACTATGATGCCCATATCGCCCAAGGCGGTACGAATCTG
TCTGGCGGGCAAAAACAGCGGCTGTCGATTGCCAGAGCGATTGCCCGGCGTCCAGAAATATTAATCTTTGACGATTCTTT
CTCCGCGCTTGACTATAAGACTGACCGCAAACTGCGCAGTGAGCTTAAGAAAGACGCGCATGATTCAACGATGCTGATCG
TTGCACAGCGTATTGGTACGATTAAAGATGCCGACAAGATCATTGTGCTGGAAGCCGGACGAATCGCAGGTATGGGAACC
CATGACGAACTAATGCAGTCCTGCGACGTCTATCAGGAAATTGCTTATTCTCAGCTTACGAAGGAGGAGCTTGCATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(17-293)

ABC transporter (ABC_tran)

(356-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A089IRA5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.349

100

0.533