Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   NST94_RS06155 Genome accession   NZ_CP150146
Coordinates   1409436..1410383 (+) Length   315 a.a.
NCBI ID   WP_036681839.1    Uniprot ID   A0A1R0X0A0
Organism   Paenibacillus sp. FSL H8-0282     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1404436..1415383
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NST94_RS06125 (NST94_06125) - 1404752..1405717 (+) 966 WP_076142180.1 nitronate monooxygenase family protein -
  NST94_RS06130 (NST94_06130) - 1405802..1406896 (-) 1095 WP_076128106.1 Xaa-Pro peptidase family protein -
  NST94_RS06135 (NST94_06135) - 1407122..1407964 (+) 843 WP_076185723.1 SDR family oxidoreductase -
  NST94_RS06140 (NST94_06140) - 1407990..1408493 (+) 504 WP_076142169.1 GNAT family N-acetyltransferase -
  NST94_RS06145 (NST94_06145) - 1408511..1408855 (-) 345 WP_076128100.1 helix-turn-helix domain-containing protein -
  NST94_RS06150 (NST94_06150) - 1408947..1409207 (+) 261 WP_036681837.1 YqkE family protein -
  NST94_RS06155 (NST94_06155) ceuB 1409436..1410383 (+) 948 WP_036681839.1 ABC transporter permease Machinery gene
  NST94_RS06160 (NST94_06160) - 1410386..1411330 (+) 945 WP_036681842.1 iron chelate uptake ABC transporter family permease subunit -
  NST94_RS06165 (NST94_06165) - 1411324..1412079 (+) 756 WP_036681845.1 ABC transporter ATP-binding protein -
  NST94_RS06170 (NST94_06170) - 1412202..1413206 (+) 1005 WP_269473479.1 siderophore ABC transporter substrate-binding protein -
  NST94_RS06175 (NST94_06175) - 1413373..1413876 (+) 504 WP_036681849.1 sigma-70 family RNA polymerase sigma factor -
  NST94_RS06180 (NST94_06180) - 1413869..1415062 (+) 1194 WP_339281780.1 anti-sigma factor -

Sequence


Protein


Download         Length: 315 a.a.        Molecular weight: 34506.70 Da        Isoelectric Point: 10.0525

>NTDB_id=963315 NST94_RS06155 WP_036681839.1 1409436..1410383(+) (ceuB) [Paenibacillus sp. FSL H8-0282]
MKLKYLSLLLIVFSFISLFIGVKDISPLDLFHLTESQAQTLLVSRIPRLAALIIAGVSMSIAGLIMQQLSRNKFVSPTTA
GTMDSAKFGILVSLMLFTGATPMQKLLVAFVFALLGTFIFMRILDRIKFKDSIFIPLVGLMFGNIVGSITTFFAYKNDLI
QNISSWMLGDFSTIIKGQYELIYISIPLVILAYLFANKFTVAGMGEDFSVNLGMNYKAVVNVGLVIVALISSVVILTVGT
IPFLGLVVPNIVTLYIGDNLKKSLAHTAILGAVFLLFCDILGRLIIYPYEISISLTVGVIGSGLFIYLLMRRKAN

Nucleotide


Download         Length: 948 bp        

>NTDB_id=963315 NST94_RS06155 WP_036681839.1 1409436..1410383(+) (ceuB) [Paenibacillus sp. FSL H8-0282]
ATGAAACTAAAATATTTGTCCCTACTTCTAATAGTATTTTCATTTATATCTTTGTTTATAGGCGTTAAAGATATATCCCC
ATTAGATCTCTTTCATCTTACGGAATCTCAAGCACAGACCTTGCTGGTAAGCCGGATTCCCCGGTTAGCCGCATTGATTA
TCGCTGGAGTCAGCATGAGTATTGCCGGATTAATTATGCAACAGCTGTCACGCAATAAATTCGTCTCCCCGACTACGGCA
GGGACGATGGATTCCGCGAAATTTGGTATTCTCGTATCCCTCATGTTATTCACAGGCGCAACGCCAATGCAGAAATTGCT
TGTTGCTTTTGTTTTTGCACTATTGGGCACCTTTATTTTTATGAGAATCCTGGATCGGATCAAGTTCAAGGATAGTATTT
TTATCCCGCTGGTCGGACTCATGTTCGGAAACATTGTAGGTTCGATTACAACATTTTTTGCGTATAAAAATGATTTGATT
CAGAATATCTCGTCTTGGATGCTTGGAGATTTCTCAACGATTATCAAAGGCCAATACGAATTAATTTATATCAGCATTCC
ACTTGTCATTCTGGCGTATCTCTTCGCTAATAAATTTACGGTAGCTGGTATGGGCGAGGATTTCTCCGTCAATCTTGGCA
TGAATTACAAAGCGGTTGTCAACGTGGGATTGGTAATTGTAGCGTTAATCTCTTCTGTTGTCATTTTAACCGTAGGTACG
ATTCCATTTCTGGGTCTGGTAGTACCTAACATTGTAACGTTGTACATAGGAGATAACCTCAAAAAAAGTCTGGCGCATAC
AGCCATTCTCGGAGCGGTGTTCCTCCTGTTCTGCGATATTCTGGGCAGGCTCATTATCTATCCATATGAAATATCAATCA
GTCTCACGGTAGGCGTCATCGGTAGTGGTCTGTTTATCTACTTGCTGATGAGAAGAAAGGCGAACTAG

Domains


Predicted by InterproScan.

(9-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1R0X0A0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

56.051

99.683

0.559