Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | R0C96_RS27710 | Genome accession | NZ_CP150132 |
| Coordinates | 5829037..5829594 (+) | Length | 185 a.a. |
| NCBI ID | WP_003094697.1 | Uniprot ID | A0A6N0KGD7 |
| Organism | Pseudomonas aeruginosa strain PSA9 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5824037..5834594
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R0C96_RS27690 (R0C96_0027690) | pilR | 5825313..5826650 (+) | 1338 | WP_003094694.1 | two-component system response regulator PilR | Regulator |
| R0C96_RS27695 (R0C96_0027695) | thiO | 5826696..5827790 (-) | 1095 | WP_003094695.1 | glycine oxidase ThiO | - |
| R0C96_RS27700 (R0C96_0027700) | - | 5827925..5828434 (+) | 510 | WP_015503652.1 | Tfp pilus assembly protein FimT/FimU | - |
| R0C96_RS27705 (R0C96_0027705) | - | 5828540..5829046 (+) | 507 | WP_003094696.1 | Tfp pilus assembly protein FimT/FimU | - |
| R0C96_RS27710 (R0C96_0027710) | pilV | 5829037..5829594 (+) | 558 | WP_003094697.1 | type 4a pilus minor pilin PilV | Machinery gene |
| R0C96_RS27715 (R0C96_0027715) | pilW | 5829591..5830415 (+) | 825 | WP_003094698.1 | type 4a pilus minor pilin PilW | - |
| R0C96_RS27720 (R0C96_0027720) | pilX | 5830412..5830999 (+) | 588 | WP_003094700.1 | type 4a pilus minor pilin PilX | - |
| R0C96_RS27725 (R0C96_0027725) | pilY1 | 5831011..5834502 (+) | 3492 | WP_003094704.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20069.21 Da Isoelectric Point: 8.2164
>NTDB_id=963113 R0C96_RS27710 WP_003094697.1 5829037..5829594(+) (pilV) [Pseudomonas aeruginosa strain PSA9]
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
MLLKSRHKPLYQSGFSMIEVLVALLLISIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAIKDRLGCWAEQVKNELPGAGDLLKSDYYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNAADSSADTSLCYYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=963113 R0C96_RS27710 WP_003094697.1 5829037..5829594(+) (pilV) [Pseudomonas aeruginosa strain PSA9]
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAATCGCGGCACAAGCCGCTGTACCAATCCGGCTTCAGCATGATCGAAGTGCTGGTCGCCCTGCTGCTGAT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTCGAGCGCAACAAGG
CAGCCATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCGAGCCCGAAGGCGCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCGTCCTCCTGCACGCCATTGCCCGACGCGAT
CAAGGACCGCCTGGGATGCTGGGCGGAACAGGTGAAGAACGAACTGCCAGGCGCTGGCGACCTGCTGAAGAGCGACTACT
ACATCTGCCGCAGCTCGAAGCCGGGCGACTGCGACGGCAAGGGCTCCATGCTGGAAATCCGCCTGGCCTGGCGCGGCAAG
CAAGGCGCCTGCGTCAACGCCGCCGACAGCAGCGCCGACACCTCCCTCTGCTACTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
97.838 |
100 |
0.978 |